C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000675_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115904-ENSG00000205111 CGP 9606 2:38981396-39229588
GeneTranscriptPositionBiotype
ENSG00000115904 (SOS1)
son of sevenless homolog 1 (Drosophila) 		ENST00000395038 (SOS1-003) 38985686-39120450 protein_coding
ENST00000402219 (SOS1-201) 38981553-39120463 protein_coding
ENST00000426016 (SOS1-001) 38981396-39121051 protein_coding
ENST00000451331 (SOS1-004) 39056733-39124345 protein_coding
ENST00000461545 (SOS1-005) 39024121-39051357 retained_intron
ENST00000469581 (SOS1-007) 38986046-38987725 retained_intron
ENST00000472480 (SOS1-008) 39022876-39023823 processed_transcript
ENST00000474390 (SOS1-006) 38997341-39007499 retained_intron
ENSG00000202309 (Y_RNA)
Y RNA 		ENST00000365439 (Y_RNA.1-554) 39128826-39128927 misc_RNA
ENSG00000205111 (CDKL4)
cyclin-dependent kinase-like 4 		ENST00000378803 (CDKL4-001) 39178547-39229532 protein_coding
ENST00000395035 (CDKL4-002) 39178547-39229532 protein_coding
ENST00000419111 (CDKL4-004) 39204527-39229588 nonsense_mediated_decay
ENST00000451199 (CDKL4-003) 39175646-39187707 protein_coding
ENSG00000225900 (HSPE1P13)
heat shock 10kDa protein 1 pseudogene 13 		ENST00000451143 (HSPE1P13-001) 39098149-39098445 processed_pseudogene
ENSG00000229692 (SOS1-IT1)
SOS1 intronic transcript 1 (non-protein coding) 		ENST00000420644 (SOS1-IT1-001) 38992976-38993857 sense_intronic
ENST00000594472 (SOS1-IT1-002) 38992279-38993836 sense_intronic
ENST00000609942 (SOS1-IT1-003) 38992824-38993836 sense_intronic
CIL_000675_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024241-ENSMUSG00000033966 CGP 10090 17:80393752-80563834
GeneTranscriptPositionBiotype
ENSMUSG00000024241 (Sos1)
son of sevenless homolog 1 (Drosophila) 		ENSMUST00000068714 (Sos1-201) 80393752-80480453 protein_coding
ENSMUSG00000033966 (Cdkl4)
cyclin-dependent kinase-like 4 		ENSMUST00000086545 (Cdkl4-201) 80523550-80563834 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000675_0001ENSG00000115904ENST00000395038ENST00000402219ENST00000426016ENST00000451331ENST00000461545ENST00000469581ENST00000472480ENST00000474390ENSG00000202309ENST00000365439ENSG00000205111ENST00000378803ENST00000395035ENST00000419111ENST00000451199ENSG00000225900ENST00000451143ENSG00000229692ENST00000420644ENST00000594472ENST00000609942CIL_000675_0002ENSMUSG00000024241ENSMUST00000068714ENSMUSG00000033966ENSMUST00000086545
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000675_0001ENSG00000115904ENST00000395038ENST00000402219ENST00000426016ENSG00000202309ENST00000365439ENSG00000205111ENST00000378803ENST00000395035ENST00000419111ENST00000451199ENSG00000225900ENST00000451143ENSG00000229692ENST00000420644ENST00000594472ENST00000609942CIL_000675_0002ENSMUSG00000024241ENSMUST00000068714ENSMUSG00000033966ENSMUST00000086545
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115904 ENST00000395038 1.235±0.00 N/A 2.967±0.00 2.397±1.29 3.694±1.10 2.890±0.00 2.383±0.27 1.898±0.00 4.750±0.00 4.839±0.00 0.881±0.00 3.816±0.00 0.692±0.00 2.869±0.00
ENST00000402219 2.901±0.00 1.693±0.00 N/A 1.415±0.26 4.091±1.03 2.732±0.00 1.956±1.23 1.605±0.69 1.227±0.37 2.626±0.77 3.151±1.60 3.125±1.67 2.795±1.18 2.112±1.27
ENST00000426016 N/A N/A N/A N/A N/A 2.476±0.00 0.433±0.00 N/A N/A N/A N/A 4.008±0.00 N/A N/A
ENST00000451331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000202309 ENST00000365439 N/A 0.518±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000205111 ENST00000378803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A 0.358±0.00
ENST00000395035 N/A 0.019±0.00 0.240±0.00 0.085±0.00 0.122±0.07 0.130±0.00 0.019±0.00 0.018±0.00 0.243±0.00 0.231±0.11 N/A N/A 0.093±0.02 0.528±0.25
ENST00000419111 N/A N/A N/A N/A N/A N/A 0.485±0.00 N/A N/A N/A N/A 0.970±0.00 0.071±0.03 1.325±0.00
ENST00000451199 N/A 0.144±0.00 N/A 0.163±0.06 0.016±0.00 0.132±0.00 N/A N/A N/A N/A N/A 0.102±0.00 N/A N/A
ENSG00000225900 ENST00000451143 N/A 0.190±0.00 N/A 0.180±0.07 0.455±0.09 N/A N/A 2.205±0.00 4.656±0.00 N/A N/A 0.380±0.19 0.142±0.00 N/A
ENSG00000229692 ENST00000420644 N/A N/A N/A N/A 1.781±0.00 N/A N/A N/A N/A N/A N/A 0.181±0.00 N/A N/A
ENST00000594472 0.047±0.00 0.240±0.00 0.556±0.00 0.358±0.07 0.818±0.00 1.488±0.26 0.896±0.57 1.096±0.72 0.886±0.82 1.787±0.00 0.153±0.00 0.361±0.20 0.278±0.14 0.436±0.16
ENST00000609942 N/A 0.202±0.00 N/A 0.128±0.00 N/A N/A 0.220±0.00 0.240±0.00 0.790±0.76 N/A 0.212±0.00 N/A 0.293±0.18 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024241 ENSMUST00000068714 2.178±0.63 1.628±0.19 0.912±0.27 5.305±3.33 1.490±0.47 2.040±0.32 1.050±0.34 2.724±0.25 1.753±0.57 2.010±0.38 2.317±0.23 2.362±1.30 8.212±1.68 1.500±0.91
ENSMUSG00000033966 ENSMUST00000086545 0.957±0.59 0.119±0.04 N/A 1.298±0.00 0.264±0.11 0.062±0.04 0.080±0.05 0.115±0.05 0.089±0.05 1.225±0.61 0.014±0.01 1.008±0.25 0.284±0.14 8.548±4.77

Loading