C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppressor of cytokine signaling 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395472 SOCS4-001 ENSG00000180008 9606 + 14:55027230-55049488 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000395472
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000395472 1.928±0.00 1.523±0.00 0.569±0.00 2.135±0.30 1.449±0.65 2.050±0.44 1.223±0.82 1.765±1.16 1.542±0.88 1.630±0.04 0.224±0.00 1.867±0.62 0.668±0.38 1.775±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000603 CIL_000603_0002 CGP 14:54938950-55049488
CIL_0000IA CIL_0000IA_0001 CGP 14:55027230-55070192

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007175 IDA negative regulation of epidermal growth factor-activated receptor activity
GO:0016567 IEA protein ubiquitination
GO:0032436 IEA positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0035556 IEA intracellular signal transduction
GO:0040008 IEA regulation of growth

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000065562 Socs4-001 protein_coding Mus_musculus 0 1539

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