C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sperm antigen with calponin homology and coiled-coil domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395525 SPECC1-026 ENSG00000128487 9606 + 17:20156089-20237179 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMusclePlacentaTestisENST00000395525
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Placenta Testis
ENST00000395525 6.478±0.00 18.827±0.00 10.847±0.00 6.229±0.00 2.615±0.00 0.491±0.00 8.532±0.00 1.270±0.00 1.026±0.00 1.720±0.00 15.142±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00073H CIL_00073H_0001 CGP 17:19904302-20319026

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0007155 IDA cell adhesion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049836 Specc1-001 protein_coding Mus_musculus 0 2030
ENSMUST00000092415 Specc1-002 protein_coding Mus_musculus 0 1945
ENSMUST00000108709 Specc1-201 protein_coding Mus_musculus 0 1886

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