C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sperm antigen with calponin homology and coiled-coil domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395530 SPECC1-004 ENSG00000128487 9606 + 17:20155989-20319026 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000395530
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000395530 0.655±0.00 4.076±2.34 1.439±0.00 0.795±0.17 0.391±0.09 0.599±0.00 0.030±0.00 0.575±0.00 0.256±0.00 1.963±1.57 3.791±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00073H CIL_00073H_0001 CGP 17:19904302-20319026

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0007155 IDA cell adhesion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092415 Specc1-002 protein_coding Mus_musculus 0 2916
ENSMUST00000108709 Specc1-201 protein_coding Mus_musculus 0 2811
ENSMUST00000049836 Specc1-001 protein_coding Mus_musculus 0 1886

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