C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: neuronal regeneration related protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395634 NREP-008 ENSG00000134986 9606 - 5:111729984-111976931 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004US CIL_0004US_0001 CGP 5:111496033-111997464
CIL_0008PC CIL_0008PC_0001 VISTA 5:111547843-112153084
CIL_0008TM CIL_0008TM_0001 VISTA 5:111547866-112149626

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0017015 IEA regulation of transforming growth factor beta receptor signaling pathway
GO:0031103 IEA axon regeneration
GO:0045664 IEA regulation of neuron differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168890 Nrep-202 protein_coding Mus_musculus 0 1430
ENSMUST00000171533 Nrep-203 protein_coding Mus_musculus 0 1430
ENSMUST00000051087 Nrep-201 protein_coding Mus_musculus 0 1430

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