C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif containing 16-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395671 TRIM16L-001 ENSG00000108448 9606 + 17:18722023-18736118 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000395671
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000395671 0.780±0.00 0.469±0.00 0.046±0.00 0.652±0.00 3.431±0.00 1.196±0.00 0.399±0.01 2.745±0.00 0.976±0.00 0.387±0.00 1.832±0.00 0.649±0.28 0.722±0.13 0.957±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DU CIL_0000DU_0001 CGP 17:18658429-18736118
CIL_0005CX CIL_0005CX_0001 CGP 17:18697998-18779349

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108703 Trim16-002 protein_coding Mus_musculus 0 1197
ENSMUST00000055006 Trim16-001 protein_coding Mus_musculus 0 1197
ENSMUST00000128623 Trim16-005 processed_transcript Mus_musculus 0 1110
ENSMUST00000072639 Trim16-004 protein_coding Mus_musculus 0 952

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