C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007BS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000042502-ENSDARG00000068013 CGP 7955 10:46362731-46378152
GeneTranscriptPositionBiotype
ENSDARG00000042502 (h2afvb)
H2A histone family, member Vb 		ENSDART00000062324 (h2afvb-201) 46362731-46372778 protein_coding
ENSDARG00000068013 (purbb)
purine-rich element binding protein Bb 		ENSDART00000081308 (purbb-201) 46376393-46378152 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0007BS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000105968-ENSG00000146676 CGP 9606 7:44826791-44885361
GeneTranscriptPositionBiotype
ENSG00000105968 (H2AFV)
H2A histone family, member V 		ENST00000222690 (H2AFV-001) 44826791-44848077 protein_coding
ENST00000308153 (H2AFV-002) 44834228-44848063 protein_coding
ENST00000349299 (H2AFV-004) 44834228-44848021 protein_coding
ENST00000350771 (H2AFV-003) 44834228-44848076 protein_coding
ENST00000381124 (H2AFV-007) 44834239-44848080 protein_coding
ENST00000437072 (H2AFV-005) 44829897-44848082 protein_coding
ENST00000446531 (H2AFV-006) 44834925-44848083 protein_coding
ENST00000521529 (H2AFV-008) 44834310-44848040 protein_coding
ENSG00000146676 (PURB)
purine-rich element binding protein B 		ENST00000395699 (PURB-001) 44876293-44885361 protein_coding
ENSG00000234183 (AC004854.4)
 ENST00000443162 (AC004854.4-002) 44848416-44849568 antisense
ENST00000450016 (AC004854.4-001) 44849059-44849565 antisense

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0007BS_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041126-ENSMUSG00000094483 CGP 10090 11:6427229-6475917
GeneTranscriptPositionBiotype
ENSMUSG00000041126 (H2afv)
H2A histone family, member V 		ENSMUST00000093346 (H2afv-002) 6428138-6444352 protein_coding
ENSMUST00000109737 (H2afv-001) 6427229-6444443 protein_coding
ENSMUSG00000079988 (Gm11970)
predicted gene 11970 		ENSMUST00000116105 (Gm11970-001) 6446218-6446537 processed_pseudogene
ENSMUSG00000083693 (Gm11971)
predicted gene 11971 		ENSMUST00000117715 (Gm11971-001) 6453151-6453438 processed_pseudogene
ENSMUSG00000084280 (Gm11972)
predicted gene 11972 		ENSMUST00000118514 (Gm11972-001) 6455517-6455905 processed_pseudogene
ENSMUSG00000094483 (Purb)
purine rich element binding protein B 		ENSMUST00000179343 (Purb-001) 6467599-6475917 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007BS_0001ENSDARG00000042502ENSDART00000062324ENSDARG00000068013ENSDART00000081308CIL_0007BS_0002ENSG00000105968ENST00000222690ENST00000308153ENST00000349299ENST00000350771ENST00000381124ENST00000437072ENST00000446531ENST00000521529ENSG00000146676ENST00000395699ENSG00000234183ENST00000443162ENST00000450016CIL_0007BS_0003ENSMUSG00000041126ENSMUST00000093346ENSMUST00000109737ENSMUSG00000079988ENSMUST00000116105ENSMUSG00000083693ENSMUST00000117715ENSMUSG00000084280ENSMUST00000118514ENSMUSG00000094483ENSMUST00000179343
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007BS_0001ENSDARG00000042502ENSDART00000062324ENSDARG00000068013ENSDART00000081308CIL_0007BS_0002ENSG00000105968ENST00000222690ENST00000308153ENST00000349299ENST00000350771ENST00000521529ENSG00000146676ENST00000395699ENSG00000234183ENST00000443162ENST00000450016CIL_0007BS_0003ENSMUSG00000041126ENSMUST00000093346ENSMUST00000109737ENSMUSG00000079988ENSMUST00000116105ENSMUSG00000083693ENSMUST00000117715ENSMUSG00000084280ENSMUST00000118514ENSMUSG00000094483ENSMUST00000179343
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000042502 ENSDART00000062324 N/A N/A N/A 49.870±43.80 N/A N/A 32.170±24.47 32.463±32.06 4.777±0.00 N/A 33.029±0.00 N/A N/A N/A
ENSDARG00000068013 ENSDART00000081308 N/A N/A N/A 5.870±0.43 N/A N/A 3.782±2.63 2.647±0.39 1.111±0.00 N/A 2.153±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105968 ENST00000222690 5.940±0.00 10.158±0.00 N/A 23.351±0.00 10.847±0.00 10.106±0.00 9.490±0.00 11.622±0.00 9.806±0.00 10.043±0.00 9.559±3.40 10.852±2.88 5.726±0.59 8.721±0.64
ENST00000308153 N/A N/A 6.389±0.00 12.336±0.00 18.229±8.04 27.124±15.05 N/A 10.766±0.00 N/A 20.778±10.14 N/A 34.819±15.49 33.130±9.42 31.344±10.18
ENST00000349299 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.869±0.00 N/A N/A N/A
ENST00000350771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 38.062±0.00 18.649±0.00 N/A
ENST00000381124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 52.124±0.00 20.667±0.00 34.776±0.00
ENSG00000146676 ENST00000395699 6.875±0.00 6.237±0.00 N/A 7.708±2.56 4.477±0.00 5.612±1.12 2.766±1.39 3.857±1.57 3.358±2.11 5.582±0.12 3.971±0.00 5.061±0.58 4.709±0.25 N/A
ENSG00000234183 ENST00000443162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.342±0.11 N/A N/A
ENST00000450016 0.104±0.00 N/A N/A 0.385±0.00 N/A 0.289±0.00 0.251±0.00 0.280±0.07 0.135±0.00 0.141±0.00 N/A 1.028±0.18 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041126 ENSMUST00000093346 18.648±7.24 N/A 23.831±0.87 45.909±10.72 12.326±1.62 N/A 15.127±1.03 19.192±1.66 27.864±4.17 N/A 15.512±1.41 75.022±48.67 35.656±21.09 12.022±8.36
ENSMUST00000109737 22.218±10.37 23.708±4.44 22.729±4.60 35.256±23.47 15.641±10.18 44.772±9.84 15.211±2.68 30.165±8.96 22.927±5.40 36.092±8.26 11.405±1.37 47.963±26.70 8.057±6.65 4.855±2.49
ENSMUSG00000079988 ENSMUST00000116105 N/A N/A N/A 0.027±0.00 N/A N/A N/A N/A 0.051±0.01 N/A N/A N/A 0.514±0.00 1.110±1.20
ENSMUSG00000083693 ENSMUST00000117715 0.671±0.01 1.237±0.33 N/A N/A N/A 1.275±0.37 1.588±0.46 N/A 0.209±0.07 0.837±0.52 N/A 1.682±0.00 6.466±4.99 1.653±1.01
ENSMUSG00000084280 ENSMUST00000118514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.249±0.07
ENSMUSG00000094483 ENSMUST00000179343 8.377±0.00 13.158±2.76 9.043±2.31 10.921±9.91 7.516±2.38 8.594±0.95 2.213±0.00 4.992±0.91 4.182±2.17 10.901±0.00 3.846±0.31 9.480±2.70 11.928±4.13 3.561±1.36

Loading