C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: replication termination factor 2 domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395881 RTFDC1-004 ENSG00000022277 9606 + 20:56468614-56518887 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000395881
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000395881 36.384±0.00 38.710±0.00 2.933±0.00 32.224±23.22 20.612±16.15 25.279±17.08 10.682±6.65 16.507±10.33 10.580±3.65 12.102±7.47 19.420±15.59 30.180±13.95 34.235±9.73 39.058±4.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099D CIL_00099D_0001 VISTA 20:56155251-56756351
CIL_00036G CIL_00036G_0001 CGP 20:56412112-56519449
CIL_00015M CIL_00015M_0002 CGP 20:56468585-56525925

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109132 Rtfdc1-003 retained_intron Mus_musculus 0 688
ENSMUST00000029005 Rtfdc1-001 protein_coding Mus_musculus 0 688
ENSMUST00000140048 Rtfdc1-002 processed_transcript Mus_musculus 4e-34 150

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