C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S29
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396020 RPS29-002 ENSG00000213741 9606 - 14:49570984-49586376 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungOvaryENST00000396020
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Ovary
ENST00000396020 0.484±0.00 1.065±0.00 2.623±0.00 0.304±0.00 1.006±0.43 0.935±0.00 0.703±0.00 0.676±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Q4 CIL_0005Q4_0001 CGP 14:46839629-49599164
CIL_0005Q3 CIL_0005Q3_0001 CGP 14:49570984-49614672

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003735 IDA:IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0005925 IDA focal adhesion
GO:0006412 IC:IEA translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0008270 IDA zinc ion binding
GO:0010467 TAS gene expression
GO:0015935 IDA small ribosomal subunit
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022627 IDA cytosolic small ribosomal subunit
GO:0044267 TAS cellular protein metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

No Homologs available.

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