C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cholecystokinin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396169 CCK-002 ENSG00000187094 9606 - 3:42257825-42266207 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENST00000396169
Transcript ID Brain Testis
ENST00000396169 6.677±0.00 0.208±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RR CIL_0007RR_0001 VISTA 3:41771738-42373225
CIL_000483 CIL_000483_0001 CGP 3:42013802-42266207
CIL_00047Y CIL_00047Y_0001 CGP 3:42257825-42410600

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001662 IEA behavioral fear response
GO:0001764 ISS neuron migration
GO:0001836 IEA release of cytochrome c from mitochondria
GO:0005179 TAS:IEA hormone activity
GO:0005184 ISS neuropeptide hormone activity
GO:0005515 IPI protein binding
GO:0005576 TAS:IEA extracellular region
GO:0005615 IEA extracellular space
GO:0006915 IEA apoptotic process
GO:0006919 IEA activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0007165 TAS signal transduction
GO:0007205 IEA protein kinase C-activating G-protein coupled receptor signaling pathway
GO:0007409 ISS axonogenesis
GO:0008284 IEA positive regulation of cell proliferation
GO:0030424 ISS axon
GO:0030425 IEA dendrite
GO:0032099 IEA negative regulation of appetite
GO:0032461 IEA positive regulation of protein oligomerization
GO:0042755 ISS eating behavior
GO:0043025 IEA neuronal cell body
GO:0043065 IEA positive regulation of apoptotic process
GO:0043194 IEA axon initial segment
GO:0043195 IEA terminal bouton
GO:0043203 IEA axon hillock
GO:0043204 IEA perikaryon
GO:0050731 IEA positive regulation of peptidyl-tyrosine phosphorylation
GO:0051901 IEA positive regulation of mitochondrial depolarization
GO:0051930 IEA regulation of sensory perception of pain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035120 Cck-201 protein_coding Mus_musculus 0 357

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