C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane channel-like 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396229 TMC5-201 ENSG00000103534 9606 + 16:19410735-19499113 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartOvaryPlacentaENST00000396229
Transcript ID Brain Breast Heart Ovary Placenta
ENST00000396229 0.051±0.00 0.473±0.00 0.009±0.00 2.021±0.00 1.145±0.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MY CIL_0006MY_0001 CGP 16:19410496-19522145

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006811 IEA ion transport
GO:0016021 IEA integral component of membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098088 Tmc5-201 protein_coding Mus_musculus 0 2010
ENSMUST00000121744 Tmc5-002 protein_coding Mus_musculus 0 2010
ENSMUST00000121715 Tmc5-001 protein_coding Mus_musculus 0 2010
ENSMUST00000057320 Tmc5-003 protein_coding Mus_musculus 0 1989

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