C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006MY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000103534-ENSG00000006007 CGP 9606 16:19410496-19522145
GeneTranscriptPositionBiotype
ENSG00000006007 (GDE1)
glycerophosphodiester phosphodiesterase 1
ENST00000353258 (GDE1-001) 19501689-19522145 protein_coding
ENST00000563645 (GDE1-005) 19503101-19505132 retained_intron
ENST00000564172 (GDE1-002) 19502383-19522123 nonsense_mediated_decay
ENST00000569773 (GDE1-003) 19507685-19521588 protein_coding
ENST00000569899 (GDE1-004) 19503861-19517168 protein_coding
ENSG00000103534 (TMC5)
transmembrane channel-like 5
ENST00000219821 (TMC5-002) 19456450-19499113 protein_coding
ENST00000381414 (TMC5-001) 19410723-19499113 protein_coding
ENST00000396229 (TMC5-201) 19410735-19499113 protein_coding
ENST00000541464 (TMC5-007) 19410539-19498140 protein_coding
ENST00000542583 (TMC5-006) 19417696-19499113 protein_coding
ENST00000561503 (TMC5-004) 19456484-19498218 protein_coding
ENST00000563675 (TMC5-009) 19410496-19430640 processed_transcript
ENST00000564959 (TMC5-005) 19456517-19498140 protein_coding
ENST00000567478 (TMC5-008) 19456487-19492317 retained_intron
ENST00000572147 (TMC5-011) 19474165-19481426 nonsense_mediated_decay
ENST00000574033 (TMC5-012) 19486941-19498277 nonsense_mediated_decay
ENSG00000260592 (CTA-363E6.6)
ENST00000561762 (CTA-363E6.6-001) 19476916-19487899 antisense
ENSG00000260934 (CTA-363E6.7)
ENST00000569345 (CTA-363E6.7-001) 19501689-19502286 antisense
CIL_0006MY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030650-ENSMUSG00000033917 CGP 10090 7:118597297-118705778
GeneTranscriptPositionBiotype
ENSMUSG00000030650 (Tmc5)
transmembrane channel-like gene family 5
ENSMUST00000057320 (Tmc5-003) 118633736-118675086 protein_coding
ENSMUST00000098088 (Tmc5-201) 118597297-118675085 protein_coding
ENSMUST00000121715 (Tmc5-001) 118597297-118675086 protein_coding
ENSMUST00000121744 (Tmc5-002) 118600170-118675086 protein_coding
ENSMUST00000155572 (Tmc5-004) 118622514-118623469 protein_coding
ENSMUSG00000033917 (Gde1)
glycerophosphodiester phosphodiesterase 1
ENSMUST00000038791 (Gde1-001) 118688545-118705778 protein_coding
ENSMUST00000132509 (Gde1-002) 118691583-118705380 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006MY_0001ENSG00000006007ENST00000353258ENST00000563645ENST00000564172ENST00000569773ENST00000569899ENSG00000103534ENST00000219821ENST00000381414ENST00000396229ENST00000541464ENST00000542583ENST00000561503ENST00000563675ENST00000564959ENST00000567478ENST00000572147ENST00000574033ENSG00000260592ENST00000561762ENSG00000260934ENST00000569345CIL_0006MY_0002ENSMUSG00000030650ENSMUST00000057320ENSMUST00000098088ENSMUST00000121715ENSMUST00000121744ENSMUST00000155572ENSMUSG00000033917ENSMUST00000038791ENSMUST00000132509
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006MY_0001ENSG00000006007ENST00000353258ENST00000563645ENST00000564172ENST00000569899ENSG00000103534ENST00000219821ENST00000396229ENST00000541464ENST00000542583ENST00000561503ENST00000564959ENST00000567478ENST00000574033ENSG00000260592ENST00000561762ENSG00000260934ENST00000569345CIL_0006MY_0002ENSMUSG00000030650ENSMUST00000057320ENSMUST00000098088ENSMUST00000121715ENSMUST00000121744ENSMUST00000155572ENSMUSG00000033917ENSMUST00000038791ENSMUST00000132509
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000006007 ENST00000353258 2.199±0.00 2.528±0.00 0.915±0.00 2.911±0.88 3.187±1.85 2.190±0.00 2.824±1.71 3.149±0.00 1.473±0.00 3.090±0.33 0.948±0.34 4.655±1.23 7.542±0.53 3.606±0.89
ENST00000563645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.757±0.00 N/A 8.748±0.00 8.496±0.00
ENST00000564172 N/A 8.703±0.00 0.904±0.00 10.870±6.63 4.121±0.00 11.724±5.53 15.205±11.39 8.322±5.12 4.665±2.32 11.731±0.00 2.812±0.05 8.554±4.94 13.877±3.56 12.717±0.00
ENST00000569773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.846±0.00 N/A N/A N/A
ENSG00000103534 ENST00000219821 0.036±0.00 0.035±0.00 N/A N/A 0.400±0.00 N/A N/A N/A N/A N/A 0.006±0.00 N/A N/A 0.651±0.00
ENST00000381414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000396229 N/A N/A N/A 0.051±0.00 0.473±0.00 N/A 0.009±0.00 N/A N/A N/A N/A 2.021±0.00 1.145±0.90 N/A
ENST00000541464 N/A N/A N/A N/A 0.881±0.00 3.423±0.00 0.029±0.00 0.304±0.00 0.073±0.00 4.290±2.35 N/A 3.336±2.47 0.897±0.02 0.829±0.00
ENST00000542583 N/A N/A N/A N/A 0.638±0.00 N/A 0.008±0.00 N/A N/A 5.078±0.00 N/A 3.148±2.53 N/A N/A
ENST00000561503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.642±0.00 N/A 1.743±0.00
ENST00000563675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.231±0.00
ENST00000567478 N/A N/A N/A 0.037±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.721±0.00
ENST00000572147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574033 0.156±0.00 N/A N/A N/A 2.872±0.00 0.305±0.00 N/A N/A 0.297±0.04 6.263±0.00 0.058±0.00 5.149±0.00 N/A 2.551±0.90
ENSG00000260592 ENST00000561762 N/A 0.111±0.00 N/A N/A N/A 0.745±0.00 N/A N/A 0.246±0.00 N/A 0.174±0.00 N/A N/A N/A
ENSG00000260934 ENST00000569345 11.046±0.00 9.848±0.00 N/A 18.562±0.00 25.797±0.00 22.573±0.00 26.986±0.00 17.174±0.00 12.462±0.00 16.931±0.00 7.458±0.00 18.092±0.00 16.881±1.43 12.964±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030650 ENSMUST00000057320 0.116±0.00 0.055±0.03 N/A 0.037±0.01 0.277±0.00 5.558±2.37 0.091±0.00 0.131±0.04 0.135±0.15 0.693±0.15 0.026±0.01 1.156±0.04 0.916±0.00 32.764±12.95
ENSMUST00000098088 0.227±0.04 N/A N/A N/A 0.234±0.14 N/A 0.202±0.06 0.170±0.00 0.021±0.00 0.310±0.00 N/A 1.143±0.38 1.836±0.57 N/A
ENSMUST00000121715 0.128±0.03 N/A 0.018±0.00 0.088±0.06 0.255±0.01 N/A 0.198±0.00 0.091±0.00 0.019±0.01 N/A 0.052±0.01 0.919±0.44 1.539±0.31 N/A
ENSMUST00000121744 0.188±0.00 0.087±0.04 N/A 0.056±0.00 0.290±0.04 10.423±3.33 0.072±0.02 0.360±0.13 0.430±0.18 0.308±0.07 0.015±0.00 1.474±1.41 3.750±2.14 N/A
ENSMUST00000155572 0.413±0.00 0.298±0.00 0.280±0.02 1.380±1.42 0.732±0.00 N/A 0.187±0.00 N/A 0.205±0.13 N/A 0.323±0.19 3.996±1.35 N/A N/A
ENSMUSG00000033917 ENSMUST00000038791 58.259±2.04 193.738±36.53 55.620±4.71 50.120±11.70 67.337±23.04 82.790±12.42 22.536±2.62 85.227±11.27 22.962±3.12 105.400±21.55 25.789±3.64 93.359±29.31 30.293±14.02 58.534±19.26
ENSMUST00000132509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.992±0.06 16.931±0.00 11.273±0.00

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