C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoglucomutase 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129127 Pgm5-003 ENSMUSG00000041731 10090 - 19:24816231-24861652 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastPlacentaENSMUST00000129127
Transcript ID Breast Placenta
ENSMUST00000129127 0.875±0.00 0.196±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086N CIL_00086N_0002 VISTA 19:24151986-24754280
CIL_0009AF CIL_0009AF_0002 VISTA 19:24645396-25246544

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000396392 PGM5-004 protein_coding Homo_sapiens 0 1040
ENST00000396396 PGM5-001 protein_coding Homo_sapiens 0 1040
ENST00000421970 PGM5P4-001 processed_pseudogene Homo_sapiens 0 268
ENST00000431583 PGM5-003 protein_coding Homo_sapiens 0 453
ENST00000604870 PGM5-006 processed_transcript Homo_sapiens 0 856

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