C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAD (Asp-Glu-Ala-Asp) box helicase 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396821 DDX17-001 ENSG00000100201 9606 - 22:38483440-38506337 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000396821
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000396821 9.675±0.00 14.022±0.00 27.513±0.00 18.714±3.09 40.112±0.82 34.679±8.54 12.908±4.69 14.573±6.70 21.433±10.15 22.035±5.78 14.602±6.19 72.707±23.44 20.478±7.61 15.906±1.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005DI CIL_0005DI_0001 CGP 22:38426327-38483447
CIL_0005DJ CIL_0005DJ_0001 CGP 22:38468062-38507660
CIL_0005DK CIL_0005DK_0001 CGP 22:38483440-38570286

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0006200 IEA ATP catabolic process
GO:0008026 IEA ATP-dependent helicase activity
GO:0009791 IEA post-embryonic development
GO:0072358 IEA cardiovascular system development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054014 Ddx17-201 protein_coding Mus_musculus 0 2998

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