C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 3, subunit B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397011 EIF3B-001 ENSG00000106263 9606 + 7:2354882-2380745 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397011
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397011 19.195±0.00 15.358±0.00 3.933±0.00 7.744±3.36 11.070±3.56 26.210±0.00 4.801±2.58 10.551±4.07 8.173±6.52 8.615±1.25 33.958±30.38 36.168±21.20 32.744±17.57 46.071±22.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ZO CIL_0000ZO_0001 CGP 7:2242222-2354318
CIL_0000ZL CIL_0000ZL_0001 CGP 7:2251770-2380745
CIL_0007RS CIL_0007RS_0001 VISTA 7:2311652-2915186
CIL_00027M CIL_00027M_0002 CGP 7:2354086-2434607

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0001731 IEA formation of translation preinitiation complex
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0003743 IDA:IEA translation initiation factor activity
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0005852 IDA:IEA eukaryotic translation initiation factor 3 complex
GO:0006412 TAS translation
GO:0006413 IC:IEA translational initiation
GO:0006446 IDA regulation of translational initiation
GO:0010467 TAS gene expression
GO:0016282 IEA eukaryotic 43S preinitiation complex
GO:0031369 IEA translation initiation factor binding
GO:0032947 TAS protein complex scaffold
GO:0033290 IEA eukaryotic 48S preinitiation complex
GO:0044267 TAS cellular protein metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100507 Eif3b-201 protein_coding Mus_musculus 0 2569

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