C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00027M_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000059654-ENSDARG00000028786 CGP 7955 3:41709748-41727723
GeneTranscriptPositionBiotype
ENSDARG00000028786 (chst12a)
carbohydrate (chondroitin 4) sulfotransferase 12a 		ENSDART00000049007 (chst12a-201) 41726348-41727723 protein_coding
ENSDART00000154401 (chst12a-001) 41721142-41727723 protein_coding
CIL_00027M_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000106263-ENSG00000136213 CGP 9606 7:2354086-2434607
GeneTranscriptPositionBiotype
ENSG00000106263 (EIF3B)
eukaryotic translation initiation factor 3, subunit B 		ENST00000360876 (EIF3B-002) 2354866-2380743 protein_coding
ENST00000397011 (EIF3B-001) 2354882-2380745 protein_coding
ENST00000413917 (EIF3B-003) 2354867-2364396 protein_coding
ENST00000431643 (EIF3B-008) 2354086-2366435 protein_coding
ENST00000463026 (EIF3B-010) 2364324-2366743 retained_intron
ENST00000463229 (EIF3B-009) 2363021-2367024 retained_intron
ENST00000465670 (EIF3B-007) 2377824-2380740 retained_intron
ENST00000466199 (EIF3B-012) 2366530-2372190 retained_intron
ENST00000468250 (EIF3B-011) 2364324-2367119 retained_intron
ENST00000468611 (EIF3B-006) 2375975-2380740 retained_intron
ENST00000475415 (EIF3B-005) 2373118-2380740 retained_intron
ENST00000494658 (EIF3B-013) 2378687-2379841 retained_intron
ENSG00000106266 (SNX8)
sorting nexin 8 		ENST00000222990 (SNX8-001) 2251770-2314464 protein_coding
ENST00000419693 (SNX8-005) 2278114-2307950 protein_coding
ENST00000435060 (SNX8-004) 2264366-2309946 protein_coding
ENST00000435336 (SNX8-002) 2264440-2354309 protein_coding
ENST00000447136 (SNX8-003) 2275116-2354318 protein_coding
ENST00000457286 (SNX8-006) 2264393-2299437 protein_coding
ENST00000479689 (SNX8-008) 2257666-2271896 retained_intron
ENST00000480807 (SNX8-009) 2255040-2257618 retained_intron
ENST00000494722 (SNX8-007) 2274960-2314441 retained_intron
ENSG00000136213 (CHST12)
carbohydrate (chondroitin 4) sulfotransferase 12 		ENST00000258711 (CHST12-002) 2403588-2434607 protein_coding
ENST00000432336 (CHST12-003) 2404099-2433375 protein_coding
ENST00000618655 (CHST12-201) 2403560-2434579 protein_coding
ENSG00000230914 (AC004840.8)
 ENST00000443103 (AC004840.8-001) 2384121-2388597 lincRNA
ENSG00000271163 (RP4-607J2.1)
 ENST00000603368 (RP4-607J2.1-001) 2393847-2394131 processed_pseudogene
CIL_00027M_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000056076-ENSMUSG00000036599 CGP 10090 5:140419305-140525724
GeneTranscriptPositionBiotype
ENSMUSG00000036599 (Chst12)
carbohydrate sulfotransferase 12 		ENSMUST00000043050 (Chst12-001) 140505550-140525724 protein_coding
ENSMUST00000124142 (Chst12-002) 140505575-140524153 protein_coding
ENSMUSG00000056076 (Eif3b)
eukaryotic translation initiation factor 3, subunit B 		ENSMUST00000100507 (Eif3b-201) 140419305-140443358 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00027M_0001ENSDARG00000028786ENSDART00000049007ENSDART00000154401CIL_00027M_0002ENSG00000106263ENST00000360876ENST00000397011ENST00000413917ENST00000431643ENST00000463026ENST00000463229ENST00000465670ENST00000466199ENST00000468250ENST00000468611ENST00000475415ENST00000494658ENSG00000106266ENST00000222990ENST00000419693ENST00000435060ENST00000435336ENST00000447136ENST00000457286ENST00000479689ENST00000480807ENST00000494722ENSG00000136213ENST00000258711ENST00000432336ENST00000618655ENSG00000230914ENST00000443103ENSG00000271163ENST00000603368CIL_00027M_0003ENSMUSG00000036599ENSMUST00000043050ENSMUST00000124142ENSMUSG00000056076ENSMUST00000100507
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00027M_0001ENSDARG00000028786ENSDART00000049007ENSDART00000154401CIL_00027M_0002ENSG00000106263ENST00000360876ENST00000397011ENST00000431643ENST00000494658ENSG00000106266ENST00000222990ENST00000435060ENST00000435336ENST00000479689ENST00000480807ENST00000494722ENSG00000136213ENST00000258711ENST00000432336ENST00000618655ENSG00000230914ENST00000443103ENSG00000271163ENST00000603368CIL_00027M_0003ENSMUSG00000036599ENSMUST00000043050ENSMUST00000124142ENSMUSG00000056076ENSMUST00000100507
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000028786 ENSDART00000049007 N/A N/A N/A N/A N/A N/A 0.720±0.00 0.753±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000154401 N/A N/A N/A 1.122±0.24 N/A N/A N/A N/A 0.100±0.00 N/A 0.583±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106263 ENST00000360876 N/A 10.827±0.00 N/A 16.695±0.00 29.332±0.00 9.078±3.06 15.724±0.00 11.674±8.04 9.432±4.56 14.057±0.00 17.711±15.41 25.429±16.62 33.754±2.07 29.053±3.49
ENST00000397011 19.195±0.00 15.358±0.00 3.933±0.00 7.744±3.36 11.070±3.56 26.210±0.00 4.801±2.58 10.551±4.07 8.173±6.52 8.615±1.25 33.958±30.38 36.168±21.20 32.744±17.57 46.071±22.60
ENST00000413917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431643 N/A N/A 1.871±0.00 N/A N/A N/A N/A N/A 3.656±0.00 N/A N/A N/A N/A N/A
ENST00000463026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465670 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 117.520±0.00 64.294±0.00 76.040±0.00
ENSG00000106266 ENST00000222990 5.932±0.00 7.840±0.00 N/A 3.494±3.05 4.771±0.00 1.731±1.22 1.465±1.27 6.380±0.00 2.435±2.29 0.515±0.16 4.887±0.00 5.787±2.84 5.679±1.91 4.559±2.25
ENST00000419693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435060 N/A N/A N/A N/A N/A N/A N/A 1.228±0.00 N/A N/A N/A N/A N/A N/A
ENST00000435336 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.886±0.00 N/A N/A N/A N/A
ENST00000447136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479689 N/A N/A 6.627±0.00 N/A N/A N/A 2.399±0.00 1.865±0.00 1.109±0.00 2.106±0.22 N/A 17.475±10.23 17.666±0.00 19.477±0.00
ENST00000480807 18.347±0.00 32.549±0.00 N/A N/A 13.825±0.00 N/A N/A N/A 10.338±0.00 5.788±0.00 N/A N/A 12.122±2.96 13.788±3.08
ENST00000494722 N/A N/A N/A 1.403±0.00 N/A N/A N/A N/A N/A N/A 5.461±0.00 N/A N/A N/A
ENSG00000136213 ENST00000258711 1.148±0.00 8.104±0.00 0.576±0.00 0.604±0.44 1.657±1.35 0.714±0.01 1.041±0.77 0.930±0.00 N/A 1.749±1.34 N/A 1.442±0.00 3.438±0.80 3.344±0.00
ENST00000432336 10.403±0.00 15.308±0.00 N/A 2.574±2.05 8.023±7.41 7.585±0.00 1.021±0.81 N/A 0.374±0.00 0.660±0.00 2.690±0.00 9.004±0.00 N/A 10.461±0.00
ENST00000618655 1.687±0.00 N/A N/A N/A 0.912±0.00 1.306±0.00 1.163±0.00 3.859±0.00 1.755±0.00 4.049±0.00 0.889±0.00 5.032±2.35 6.320±4.04 N/A
ENSG00000230914 ENST00000443103 N/A 0.123±0.00 N/A 0.329±0.00 N/A N/A N/A N/A N/A N/A N/A 0.110±0.00 N/A 0.106±0.00
ENSG00000271163 ENST00000603368 N/A N/A N/A 0.086±0.00 N/A N/A 0.076±0.00 0.083±0.00 N/A 0.088±0.00 N/A 0.278±0.00 N/A 0.142±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036599 ENSMUST00000043050 19.771±4.95 6.935±0.50 15.816±7.27 3.244±0.96 17.671±7.66 10.758±1.44 1.819±0.54 1.715±0.48 1.709±1.34 19.637±1.12 1.165±0.67 10.282±4.43 4.192±2.48 0.798±0.40
ENSMUST00000124142 N/A N/A N/A 3.544±0.00 8.525±0.00 N/A N/A N/A 0.158±0.00 N/A N/A 3.171±0.69 3.234±2.21 0.146±0.00
ENSMUSG00000056076 ENSMUST00000100507 44.577±15.59 36.907±21.09 48.649±0.49 41.305±4.81 36.029±10.11 28.676±7.52 23.875±2.32 30.195±6.53 41.053±20.68 35.525±7.15 26.401±1.21 55.939±24.45 81.825±44.66 133.495±25.38

Loading