| Transcript ID | Brain | Liver |
|---|---|---|
| ENST00000397053 | 1.651±0.00 | 0.588±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | UPF2 regulator of nonsense transcripts homolog (yeast) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000397053  |
UPF2-201 |
ENSG00000151461 |
9606 | - |
10:11920023-12043170  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008EV | CIL_0008EV_0001 | VISTA | 10:11379308-11980769 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000184 | TAS | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
| GO:0003723 | IEA | RNA binding |
| GO:0005488 | IEA | binding |
| GO:0005515 | IPI:IEA | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0005737 | IDA | cytoplasm |
| GO:0005829 | TAS | cytosol |
| GO:0006406 | TAS | mRNA export from nucleus |
| GO:0010467 | TAS | gene expression |
| GO:0016070 | TAS | RNA metabolic process |
| GO:0016071 | TAS | mRNA metabolic process |
| GO:0035145 | IDA | exon-exon junction complex |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000060092
|
Upf2-001 | protein_coding | Mus_musculus | 0 | 6911 |
|
ENSMUST00000128200
|
Upf2-002 | protein_coding | Mus_musculus | 0 | 3829 |
|
ENSMUST00000144901
|
Upf2-003 | processed_transcript | Mus_musculus | 0 | 268 |
