C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: EGF-like, fibronectin type III and laminin G domains
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397210 EGFLAM-005 ENSG00000164318 9606 + 5:38445540-38464556 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397210
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397210 7.908±0.00 9.195±0.00 0.381±0.00 4.408±2.71 2.064±0.00 3.088±0.00 0.664±0.05 1.654±1.35 4.850±2.11 6.324±0.85 10.710±2.99 8.124±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0030054 IEA cell junction
GO:0045202 IEA synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160207 Egflam-003 nonsense_mediated_decay Mus_musculus 0 833
ENSMUST00000096494 Egflam-001 protein_coding Mus_musculus 0 833
ENSMUST00000058593 Egflam-002 protein_coding Mus_musculus 0 793

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