C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FAD-dependent oxidoreductase domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397224 FOXRED2-001 ENSG00000100350 9606 - 22:36487190-36507101 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397224
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397224 0.926±0.00 3.371±0.00 6.198±0.00 1.018±0.64 0.467±0.00 0.916±0.73 0.640±0.55 0.744±0.23 1.031±0.92 5.039±0.79 1.159±0.09 3.917±3.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001W0 CIL_0001W0_0001 CGP 22:36467036-36507101
CIL_0003GX CIL_0003GX_0001 CGP 22:36487190-36529436

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001948 IPI glycoprotein binding
GO:0005515 IPI protein binding
GO:0005788 IDA endoplasmic reticulum lumen
GO:0016491 IEA oxidoreductase activity
GO:0030433 IMP ER-associated ubiquitin-dependent protein catabolic process
GO:0050660 IDA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117725 Foxred2-002 protein_coding Mus_musculus 0 1969
ENSMUST00000016696 Foxred2-001 protein_coding Mus_musculus 0 1969
ENSMUST00000129045 Foxred2-003 retained_intron Mus_musculus 0 765
ENSMUST00000162168 Zkscan5-004 nonsense_mediated_decay Mus_musculus 0.000002 60

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