C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small nuclear ribonucleoprotein polypeptide E pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397592 SNRPEP2-001 ENSG00000256968 9606 - 9:6748703-6748981 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonOvaryTestisENST00000397592
Transcript ID Colon Ovary Testis
ENST00000397592 0.120±0.00 0.879±1.08 0.099±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000166915 Snrpe-001 protein_coding Mus_musculus 0 394
ENSMUST00000121967 Gm14284-001 processed_pseudogene Mus_musculus 0 377
ENSMUST00000172079 Snrpe-005 nonsense_mediated_decay Mus_musculus 0 327
ENSMUST00000164096 Snrpe-002 protein_coding Mus_musculus 0 305
ENSMUST00000166291 Snrpe-003 protein_coding Mus_musculus 1e-17 94
ENSMUST00000171264 Snrpe-007 protein_coding Mus_musculus 0.000000000000006 84

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