C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | small nuclear ribonucleoprotein E | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000166291  |
Snrpe-003 |
ENSMUSG00000090553 |
10090 | - |
1:133603876-133610232  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008W2 | CIL_0008W2_0002 | VISTA | 1:133249313-133850886 |
| CIL_00096T | CIL_00096T_0002 | VISTA | 1:133444227-134045719 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000398 | IEA | mRNA splicing, via spliceosome |
| GO:0005681 | IEA | spliceosomal complex |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000367208
|
SNRPE-004 | protein_coding | Homo_sapiens | 1e-17 | 94 |
|
ENST00000397592
|
SNRPEP2-001 | processed_pseudogene | Homo_sapiens | 1e-17 | 94 |
|
ENST00000414487
|
SNRPE-001 | protein_coding | Homo_sapiens | 4e-17 | 94 |
|
ENST00000420249
|
SNRPEP10-001 | processed_pseudogene | Homo_sapiens | 0.0000000002 | 69 |
|
ENST00000436794
|
SNRPEP9-001 | processed_pseudogene | Homo_sapiens | 3e-22 | 108 |
|
ENST00000470492
|
SNRPE-006 | processed_transcript | Homo_sapiens | 2e-17 | 94 |
|
ENST00000475035
|
SNRPE-005 | processed_transcript | Homo_sapiens | 2e-17 | 94 |
|
ENST00000483099
|
SNRPE-002 | processed_transcript | Homo_sapiens | 4e-17 | 94 |
