C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mediator complex subunit 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397786 MED13-001 ENSG00000108510 9606 - 17:61942605-62065282 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397786
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397786 5.902±0.00 4.620±0.00 4.668±0.00 4.461±0.85 3.331±1.68 5.579±2.06 3.194±0.85 6.853±0.81 5.048±2.36 5.325±0.96 3.231±1.57 5.984±2.32 1.500±0.39 8.345±1.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JV CIL_0007JV_0001 UCNEbase 17:61126460-61946035
CIL_00096P CIL_00096P_0001 VISTA 17:61515758-62116780
CIL_00056C CIL_00056C_0002 CGP 17:61865367-62065282

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043624 Med13-001 protein_coding Mus_musculus 0 10970
ENSMUST00000140514 Med13-003 retained_intron Mus_musculus 0 989
ENSMUST00000136622 Med13-002 processed_transcript Mus_musculus 0 702
ENSMUST00000144983 Med13-004 retained_intron Mus_musculus 0 523
ENSDART00000088852 med13a-201 protein_coding Danio_rerio 1.96182e-44 187
ENSDART00000134491 med13a-001 protein_coding Danio_rerio 1.96182e-44 187

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