C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CTAGE family, member 14, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397819 CTAGE14P-001 ENSG00000214211 9606 - 2:167713663-167716065 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverLungTestisENST00000397819
Transcript ID Bladder Brain Breast Colon Heart Liver Lung Testis
ENST00000397819 0.119±0.00 0.170±0.00 0.038±0.00 0.677±0.00 0.006±0.00 0.004±0.00 0.004±0.00 0.011±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000HO CIL_0000HO_0001 CGP 2:166888487-167874041

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000176464 Ctage5-011 protein_coding Mus_musculus 0 1640
ENSMUST00000175912 Ctage5-003 protein_coding Mus_musculus 0 1629
ENSMUST00000176752 Ctage5-004 nonsense_mediated_decay Mus_musculus 0 1615
ENSMUST00000170992 Ctage5-007 protein_coding Mus_musculus 0 1476
ENSMUST00000176892 Ctage5-002 protein_coding Mus_musculus 0 1476
ENSMUST00000176322 Ctage5-008 protein_coding Mus_musculus 0 1474
ENSMUST00000069430 Ctage5-001 protein_coding Mus_musculus 0 1474
ENSMUST00000176617 Ctage5-014 nonsense_mediated_decay Mus_musculus 0 1328
ENSMUST00000176336 Ctage5-013 nonsense_mediated_decay Mus_musculus 0 1133
ENSMUST00000177162 Ctage5-012 protein_coding Mus_musculus 0 1042
ENSMUST00000177225 Ctage5-006 protein_coding Mus_musculus 0 1031
ENSMUST00000175877 Ctage5-010 protein_coding Mus_musculus 0 880
ENSMUST00000175659 Ctage5-015 retained_intron Mus_musculus 0 368
ENSMUST00000175837 Ctage5-021 nonsense_mediated_decay Mus_musculus 0 331

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