C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CTAGE family, member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000175912 Ctage5-003 ENSMUSG00000021000 10090 + 12:59129720-59190176 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverENSMUST00000175912
Transcript ID Bladder Brain Liver
ENSMUST00000175912 4.588±0.40 2.001±0.00 6.621±2.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VZ CIL_0003VZ_0002 CGP 12:59095799-59191583
CIL_0003W0 CIL_0003W0_0002 CGP 12:59129720-59219725

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000280083 CTAGE5-002 protein_coding Homo_sapiens 0 2425
ENST00000318353 CTAGE10P-001 processed_pseudogene Homo_sapiens 0 1849
ENST00000341502 CTAGE5-015 protein_coding Homo_sapiens 0 2012
ENST00000341749 CTAGE5-001 protein_coding Homo_sapiens 0 2481
ENST00000348007 CTAGE5-003 protein_coding Homo_sapiens 0 1367
ENST00000391403 CTAGE1-001 protein_coding Homo_sapiens 0 1997
ENST00000396158 CTAGE5-201 protein_coding Homo_sapiens 0 2361
ENST00000396165 CTAGE5-004 protein_coding Homo_sapiens 0 2316
ENST00000397819 CTAGE14P-001 processed_pseudogene Homo_sapiens 0 1629
ENST00000400348 CTAGE12P-001 processed_pseudogene Homo_sapiens 0 1567
ENST00000420911 CTAGE15-001 protein_coding Homo_sapiens 0 1744
ENST00000435601 CTAGE16P-001 processed_pseudogene Homo_sapiens 0 1677
ENST00000435712 CTAGE7P-001 processed_pseudogene Homo_sapiens 0 1762
ENST00000451540 CTAGE11P-001 processed_pseudogene Homo_sapiens 0 1628
ENST00000454280 CTAGE3P-001 processed_pseudogene Homo_sapiens 0 1810
ENST00000470691 CTAGE6-001 protein_coding Homo_sapiens 0 1727
ENST00000486333 CTAGE4-001 protein_coding Homo_sapiens 0 1751
ENST00000487179 CTAGE8-001 protein_coding Homo_sapiens 0 1768
ENST00000553352 CTAGE5-005 protein_coding Homo_sapiens 0 2422
ENST00000553383 CTAGE5-013 processed_transcript Homo_sapiens 0 651
ENST00000553728 RP11-407N17.3-001 protein_coding Homo_sapiens 0 2314
ENST00000556148 CTAGE5-006 protein_coding Homo_sapiens 0 2200
ENST00000557038 CTAGE5-007 protein_coding Homo_sapiens 0 2388

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