C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CTAGE family, member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176336 Ctage5-013 ENSMUSG00000021000 10090 + 12:59136109-59189952 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000176336
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000176336 3.588±0.00 14.409±7.24 14.827±8.07 6.892±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VZ CIL_0003VZ_0002 CGP 12:59095799-59191583
CIL_0003W0 CIL_0003W0_0002 CGP 12:59129720-59219725

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000280083 CTAGE5-002 protein_coding Homo_sapiens 0 1458
ENST00000318353 CTAGE10P-001 processed_pseudogene Homo_sapiens 0 1221
ENST00000341502 CTAGE5-015 protein_coding Homo_sapiens 0 1458
ENST00000341749 CTAGE5-001 protein_coding Homo_sapiens 0 1458
ENST00000348007 CTAGE5-003 protein_coding Homo_sapiens 0 1328
ENST00000391403 CTAGE1-001 protein_coding Homo_sapiens 0 582
ENST00000396158 CTAGE5-201 protein_coding Homo_sapiens 0 1393
ENST00000396165 CTAGE5-004 protein_coding Homo_sapiens 0 1458
ENST00000397819 CTAGE14P-001 processed_pseudogene Homo_sapiens 0 1133
ENST00000400348 CTAGE12P-001 processed_pseudogene Homo_sapiens 0 1038
ENST00000420911 CTAGE15-001 protein_coding Homo_sapiens 0 1083
ENST00000435601 CTAGE16P-001 processed_pseudogene Homo_sapiens 0 1094
ENST00000435712 CTAGE7P-001 processed_pseudogene Homo_sapiens 0 1162
ENST00000451540 CTAGE11P-001 processed_pseudogene Homo_sapiens 0 1094
ENST00000454280 CTAGE3P-001 processed_pseudogene Homo_sapiens 0 1218
ENST00000470691 CTAGE6-001 protein_coding Homo_sapiens 0 1066
ENST00000486333 CTAGE4-001 protein_coding Homo_sapiens 0 534
ENST00000487179 CTAGE8-001 protein_coding Homo_sapiens 0 545
ENST00000553352 CTAGE5-005 protein_coding Homo_sapiens 0 1458
ENST00000553383 CTAGE5-013 processed_transcript Homo_sapiens 0 545
ENST00000553728 RP11-407N17.3-001 protein_coding Homo_sapiens 0 1458
ENST00000556148 CTAGE5-006 protein_coding Homo_sapiens 0 1384
ENST00000557038 CTAGE5-007 protein_coding Homo_sapiens 0 1439

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