C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00051I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000006257-ENSDARG00000076644 CGP 7955 10:15283756-15342725
GeneTranscriptPositionBiotype
ENSDARG00000006257 (vldlr)
very low density lipoprotein receptor
ENSDART00000023766 (vldlr-201) 15283772-15333716 protein_coding
ENSDART00000138761 (vldlr-002) 15283756-15316474 processed_transcript
ENSDART00000139047 (vldlr-001) 15283772-15333718 protein_coding
ENSDART00000147877 (vldlr-003) 15327364-15332941 processed_transcript
ENSDARG00000076644 (kcnv2a)
potassium channel, subfamily V, member 2a
ENSDART00000136239 (kcnv2a-001) 15339385-15342725 protein_coding
CIL_00051I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000147852-ENSG00000168263 CGP 9606 9:2621834-2730037
GeneTranscriptPositionBiotype
ENSG00000080608 (KIAA0020)
KIAA0020
ENST00000382032 (KIAA0020-003) 2804167-2807974 retained_intron
ENST00000397885 (KIAA0020-001) 2804164-2844241 protein_coding
ENST00000469168 (KIAA0020-002) 2828475-2829925 processed_transcript
ENST00000490444 (KIAA0020-004) 2720469-2807830 nonsense_mediated_decay
ENSG00000147852 (VLDLR)
very low density lipoprotein receptor
ENST00000382096 (VLDLR-005) 2621975-2643355 protein_coding
ENST00000382099 (VLDLR-002) 2622100-2654480 protein_coding
ENST00000382100 (VLDLR-001) 2621834-2660053 protein_coding
ENST00000478776 (VLDLR-004) 2646338-2647768 processed_transcript
ENSG00000168263 (KCNV2)
potassium channel, subfamily V, member 2
ENST00000382082 (KCNV2-001) 2717502-2730037 protein_coding
CIL_00051I_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024924-ENSMUSG00000047298 CGP 10090 19:27216484-27337179
GeneTranscriptPositionBiotype
ENSMUSG00000024924 (Vldlr)
very low density lipoprotein receptor
ENSMUST00000025866 (Vldlr-005) 27217458-27249763 nonsense_mediated_decay
ENSMUST00000047645 (Vldlr-006) 27217357-27249727 protein_coding
ENSMUST00000163729 (Vldlr-008) 27217357-27231770 processed_transcript
ENSMUST00000164509 (Vldlr-003) 27216484-27249755 retained_intron
ENSMUST00000164746 (Vldlr-007) 27217020-27234856 protein_coding
ENSMUST00000165761 (Vldlr-009) 27238774-27243828 protein_coding
ENSMUST00000167487 (Vldlr-001) 27217357-27254231 protein_coding
ENSMUST00000172302 (Vldlr-002) 27217020-27249862 protein_coding
ENSMUSG00000047298 (Kcnv2)
potassium channel, subfamily V, member 2
ENSMUST00000056708 (Kcnv2-001) 27322588-27337179 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00051I_0001ENSDARG00000006257ENSDART00000023766ENSDART00000138761ENSDART00000139047ENSDART00000147877ENSDARG00000076644ENSDART00000136239CIL_00051I_0002ENSG00000080608ENST00000382032ENST00000397885ENST00000469168ENST00000490444ENSG00000147852ENST00000382096ENST00000382099ENST00000382100ENST00000478776ENSG00000168263ENST00000382082CIL_00051I_0003ENSMUSG00000024924ENSMUST00000025866ENSMUST00000047645ENSMUST00000163729ENSMUST00000164509ENSMUST00000164746ENSMUST00000165761ENSMUST00000167487ENSMUST00000172302ENSMUSG00000047298ENSMUST00000056708
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00051I_0001ENSDARG00000006257ENSDART00000023766ENSDART00000139047ENSDARG00000076644ENSDART00000136239CIL_00051I_0002ENSG00000080608ENST00000382032ENST00000397885ENSG00000147852ENST00000382096ENST00000382099ENST00000382100ENSG00000168263ENST00000382082CIL_00051I_0003ENSMUSG00000024924ENSMUST00000025866ENSMUST00000047645ENSMUST00000163729ENSMUST00000164509ENSMUST00000164746ENSMUST00000167487ENSMUST00000172302ENSMUSG00000047298ENSMUST00000056708
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006257 ENSDART00000023766 N/A N/A N/A N/A N/A N/A 4.342±0.54 N/A N/A N/A 0.603±0.00 N/A N/A N/A
ENSDART00000138761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000139047 N/A N/A N/A 19.527±7.91 N/A N/A N/A 31.367±8.49 1.419±0.00 N/A N/A N/A N/A N/A
ENSDART00000147877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000076644 ENSDART00000136239 N/A N/A N/A 0.120±0.07 N/A N/A 0.030±0.00 0.081±0.02 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000080608 ENST00000382032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.740±0.00 N/A N/A N/A
ENST00000397885 5.397±0.00 8.992±0.00 2.322±0.00 2.028±0.26 5.754±0.12 4.053±2.31 1.996±0.75 4.878±3.68 3.884±0.34 5.340±2.28 2.090±1.73 9.214±4.92 5.586±1.84 10.101±0.80
ENST00000469168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000147852 ENST00000382096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.879±0.00 14.116±0.00
ENST00000382099 4.760±0.00 2.133±0.00 1.284±0.00 3.241±0.06 7.504±5.30 1.712±0.54 13.261±10.40 3.372±2.73 2.107±1.79 4.586±3.64 4.358±1.14 15.740±16.54 6.757±1.22 6.352±0.25
ENST00000382100 0.866±0.00 0.508±0.00 N/A 0.312±0.06 1.909±1.45 0.433±0.00 3.077±2.08 0.718±0.00 0.426±0.33 0.908±0.37 N/A 3.026±3.63 1.369±0.81 1.030±0.70
ENST00000478776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168263 ENST00000382082 0.021±0.00 0.045±0.00 0.111±0.00 0.130±0.10 0.025±0.00 N/A 0.061±0.02 0.082±0.01 N/A 0.059±0.00 N/A 0.117±0.07 0.030±0.01 2.918±0.48
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024924 ENSMUST00000025866 11.256±0.48 N/A 2.247±0.37 N/A 4.460±0.90 N/A N/A 5.958±2.11 0.704±0.27 4.222±0.30 N/A 7.956±3.60 8.906±6.72 0.227±0.16
ENSMUST00000047645 4.906±0.20 N/A N/A N/A 3.835±1.88 N/A N/A N/A 1.115±0.16 N/A N/A N/A 1.755±0.05 0.086±0.05
ENSMUST00000163729 N/A 7.745±2.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.324±3.59 N/A N/A
ENSMUST00000164509 N/A 2.372±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164746 N/A 6.699±0.81 N/A N/A N/A 3.853±0.45 N/A N/A 1.341±0.00 N/A N/A 50.370±59.57 108.347±9.28 N/A
ENSMUST00000165761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167487 8.470±1.42 1.898±0.52 1.323±0.81 3.355±2.23 4.810±1.65 1.235±0.01 23.069±2.10 6.856±2.20 0.604±0.51 4.619±0.87 29.877±6.27 5.742±1.72 3.233±2.03 0.099±0.00
ENSMUST00000172302 8.105±1.05 4.412±0.85 1.494±0.35 N/A 4.853±1.53 2.646±0.33 17.097±1.99 6.577±2.37 0.736±0.25 4.327±1.15 N/A 11.590±2.19 N/A 0.053±0.00
ENSMUSG00000047298 ENSMUST00000056708 0.196±0.05 N/A 0.028±0.02 0.024±0.01 0.177±0.05 0.106±0.04 1.412±0.29 0.014±0.00 0.006±0.01 0.057±0.02 0.026±0.01 0.082±0.04 0.427±0.32 0.530±0.27

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