C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000398190 RP11-7D5.2-001 ENSG00000214362 9606 + 10:95594598-95595372 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryTestisENST00000398190
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Testis
ENST00000398190 0.043±0.00 0.280±0.00 0.014±0.00 0.127±0.00 0.132±0.00 0.043±0.00 0.026±0.00 0.159±0.00 0.026±0.00 0.019±0.00 0.182±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095J CIL_00095J_0001 VISTA 10:95113366-95716533
CIL_0007T2 CIL_0007T2_0001 VISTA 10:95207959-95809585
CIL_00067I CIL_00067I_0001 CGP 10:95311771-95656706

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074680 Rps3a3-001 processed_pseudogene Mus_musculus 0 778
ENSMUST00000029722 Rps3a1-001 protein_coding Mus_musculus 0 778
ENSMUST00000121859 Gm13935-001 processed_pseudogene Mus_musculus 0 634
ENSMUST00000186012 RP24-117M7.2-001 processed_pseudogene Mus_musculus 0 329

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