C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S3A3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000074680 Rps3a3-001 ENSMUSG00000059751 10090 + 13:108670603-108671397 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000074680
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000074680 0.392±0.25 0.191±0.00 2.153±1.94 0.152±0.17 0.510±0.44 0.288±0.12 0.480±0.15 0.638±0.24 0.455±0.50 0.490±0.03 0.283±0.11 0.588±0.32 0.223±0.18 0.226±0.16

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000051763 rps3a-001 protein_coding Danio_rerio 0 569
ENSDART00000137066 rps3a-002 retained_intron Danio_rerio 0 191
ENST00000274065 RPS3A-001 protein_coding Homo_sapiens 0 998
ENST00000389400 RPS3AP5-001 processed_pseudogene Homo_sapiens 0 516
ENST00000398190 RP11-7D5.2-001 processed_pseudogene Homo_sapiens 0 778
ENST00000398259 RPS3AP26-001 processed_pseudogene Homo_sapiens 0 965
ENST00000411586 RP11-118H4.1-001 processed_pseudogene Homo_sapiens 0 752
ENST00000411660 RPS3AP25-001 processed_pseudogene Homo_sapiens 0 856
ENST00000413190 RPS3AP1-001 processed_pseudogene Homo_sapiens 0 200
ENST00000418798 AC013429.5-001 processed_pseudogene Homo_sapiens 0 566
ENST00000419176 RP11-119F7.3-001 processed_pseudogene Homo_sapiens 0 632
ENST00000425466 RPS3AP44-001 processed_pseudogene Homo_sapiens 0 822
ENST00000426743 RP11-163G10.2-001 processed_pseudogene Homo_sapiens 0 556
ENST00000449832 AC009961.2-001 processed_pseudogene Homo_sapiens 0 710
ENST00000450463 CTB-1048E9.7-001 processed_pseudogene Homo_sapiens 0 732
ENST00000461022 AC010468.1-001 processed_pseudogene Homo_sapiens 0 830
ENST00000471604 RPS3AP42-001 processed_pseudogene Homo_sapiens 0 503
ENST00000472161 RPS3AP49-001 processed_pseudogene Homo_sapiens 0 876
ENST00000474167 CTC-451P13.1-001 processed_pseudogene Homo_sapiens 0 869
ENST00000479876 RPS3AP32-001 processed_pseudogene Homo_sapiens 0 412
ENST00000484430 RPS3AP6-001 processed_pseudogene Homo_sapiens 0 981
ENST00000487100 RPS3AP47-001 processed_pseudogene Homo_sapiens 0 896
ENST00000493479 RP11-555K12.1-001 processed_pseudogene Homo_sapiens 0 743
ENST00000505243 RPS3A-005 protein_coding Homo_sapiens 0 427
ENST00000506126 RPS3A-007 protein_coding Homo_sapiens 0 911
ENST00000507327 RPS3A-011 protein_coding Homo_sapiens 0 854
ENST00000507485 RPS3A-002 retained_intron Homo_sapiens 0 250
ENST00000508783 RPS3A-009 protein_coding Homo_sapiens 0 494
ENST00000509736 RPS3A-006 protein_coding Homo_sapiens 0 560
ENST00000510993 RPS3A-010 protein_coding Homo_sapiens 0 828
ENST00000512690 RPS3A-015 protein_coding Homo_sapiens 0 952
ENST00000512797 RPS3A-014 protein_coding Homo_sapiens 0 623
ENST00000514682 RPS3A-004 protein_coding Homo_sapiens 0 911
ENST00000515792 RPS3A-012 protein_coding Homo_sapiens 0 560
ENST00000515818 RPS3A-013 nonsense_mediated_decay Homo_sapiens 0 348
ENST00000519121 CTD-2073O6.1-001 processed_pseudogene Homo_sapiens 0 621
ENST00000604922 SH3D19-012 processed_transcript Homo_sapiens 0 255

Loading