C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-ethylmaleimide-sensitive factor attachment protein, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000398425 NAPB-201 ENSG00000125814 9606 - 20:23374519-23421519 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastOvaryPlacentaTestisENST00000398425
Transcript ID Adipose Adrenal Breast Ovary Placenta Testis
ENST00000398425 0.965±0.00 1.234±0.00 0.547±0.00 1.138±0.36 0.269±0.02 3.185±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MO CIL_0004MO_0002 CGP 20:23362182-23421519
CIL_00023K CIL_00023K_0001 CGP 20:23374519-23444930

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006886 IEA intracellular protein transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000136513 Napb-002 nonsense_mediated_decay Mus_musculus 0 1182
ENSMUST00000028926 Napb-001 protein_coding Mus_musculus 0 782
ENSMUST00000140647 Napb-003 retained_intron Mus_musculus 0 409

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