C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00023K_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125814-ENSG00000125823 CGP 9606 20:23374519-23444930
GeneTranscriptPositionBiotype
ENSG00000125814 (NAPB)
N-ethylmaleimide-sensitive factor attachment protein, beta 		ENST00000377026 (NAPB-001) 23374522-23421488 protein_coding
ENST00000398425 (NAPB-201) 23374519-23421519 protein_coding
ENST00000432543 (NAPB-202) 23374519-23421519 protein_coding
ENST00000468128 (NAPB-004) 23379472-23421472 processed_transcript
ENST00000472855 (NAPB-002) 23378799-23421414 processed_transcript
ENST00000487502 (NAPB-003) 23396738-23421472 processed_transcript
ENST00000617876 (NAPB-203) 23374519-23421519 protein_coding
ENSG00000125823 (CSTL1)
cystatin-like 1 		ENST00000246020 (CSTL1-001) 23440248-23444930 protein_coding
ENST00000347397 (CSTL1-201) 23439685-23444930 protein_coding
ENST00000472140 (CSTL1-002) 23439685-23440818 processed_transcript
ENST00000485969 (CSTL1-003) 23440324-23442458 processed_transcript
ENST00000619238 (CSTL1-202) 23439685-23440637 protein_coding
ENSG00000201728 (RNA5SP479)
RNA, 5S ribosomal pseudogene 479 		ENST00000364858 (RNA5SP479-201) 23380896-23381012 rRNA
CIL_00023K_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027438-ENSMUSG00000055177 CGP 10090 2:148693985-148755433
GeneTranscriptPositionBiotype
ENSMUSG00000027438 (Napb)
N-ethylmaleimide sensitive fusion protein attachment protein beta 		ENSMUST00000028926 (Napb-001) 148693985-148732467 protein_coding
ENSMUST00000136513 (Napb-002) 148693985-148732413 nonsense_mediated_decay
ENSMUST00000140647 (Napb-003) 148706418-148732391 retained_intron
ENSMUSG00000055177 (Cstl1)
cystatin-like 1 		ENSMUST00000109952 (Cstl1-003) 148750396-148755378 protein_coding
ENSMUST00000109954 (Cstl1-002) 148750361-148755378 protein_coding
ENSMUST00000109955 (Cstl1-001) 148750358-148755433 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00023K_0001ENSG00000125814ENST00000377026ENST00000398425ENST00000432543ENST00000468128ENST00000472855ENST00000487502ENST00000617876ENSG00000125823ENST00000246020ENST00000347397ENST00000472140ENST00000485969ENST00000619238ENSG00000201728ENST00000364858CIL_00023K_0002ENSMUSG00000027438ENSMUST00000028926ENSMUST00000136513ENSMUST00000140647ENSMUSG00000055177ENSMUST00000109952ENSMUST00000109954ENSMUST00000109955
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00023K_0001ENSG00000125814ENST00000377026ENST00000398425ENST00000432543ENST00000468128ENST00000472855ENST00000617876ENSG00000125823ENST00000246020ENST00000347397ENST00000485969ENST00000619238ENSG00000201728ENST00000364858CIL_00023K_0002ENSMUSG00000027438ENSMUST00000028926ENSMUST00000136513ENSMUST00000140647ENSMUSG00000055177ENSMUST00000109952ENSMUST00000109954ENSMUST00000109955
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125814 ENST00000377026 N/A N/A 0.307±0.00 82.471±22.86 1.295±0.42 3.865±0.00 0.747±0.32 0.751±0.09 0.647±0.23 1.334±0.52 0.807±0.00 1.162±0.00 0.741±0.01 N/A
ENST00000398425 0.965±0.00 1.234±0.00 N/A N/A 0.547±0.00 N/A N/A N/A N/A N/A N/A 1.138±0.36 0.269±0.02 3.185±0.03
ENST00000432543 0.729±0.00 1.327±0.00 N/A 17.747±0.00 0.293±0.00 N/A N/A N/A 0.142±0.00 N/A N/A N/A 0.205±0.00 N/A
ENST00000468128 N/A N/A N/A N/A N/A N/A N/A 0.736±0.00 2.100±0.00 N/A N/A N/A N/A N/A
ENST00000472855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.119±0.00 N/A N/A
ENST00000487502 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617876 N/A N/A 1.372±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.735±0.00 0.607±0.00 N/A
ENSG00000125823 ENST00000246020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.206±0.01 0.090±0.00 N/A
ENST00000347397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.240±0.00 N/A 0.684±0.40
ENST00000472140 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485969 0.318±0.00 0.382±0.00 N/A 0.207±0.00 0.441±0.00 0.183±0.00 0.100±0.00 0.117±0.00 0.264±0.00 0.178±0.00 0.571±0.00 N/A N/A N/A
ENST00000619238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.458±0.00 N/A 0.876±0.00
ENSG00000201728 ENST00000364858 0.191±0.00 N/A N/A N/A N/A N/A 0.517±0.00 N/A N/A N/A N/A N/A N/A 0.740±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027438 ENSMUST00000028926 N/A 0.339±0.18 N/A 29.829±21.80 N/A 0.317±0.17 0.311±0.23 0.500±0.24 0.077±0.03 0.744±0.00 N/A N/A N/A 0.172±0.06
ENSMUST00000136513 0.785±0.26 0.565±0.25 1.813±0.19 N/A 0.714±0.65 0.383±0.10 0.429±0.07 0.435±0.08 0.339±0.17 0.462±0.32 1.348±0.87 1.038±0.37 0.285±0.14 0.396±0.13
ENSMUST00000140647 0.186±0.03 0.268±0.10 N/A N/A 0.136±0.06 0.086±0.01 0.212±0.05 0.112±0.00 0.155±0.05 N/A N/A 0.252±0.09 N/A 0.141±0.02
ENSMUSG00000055177 ENSMUST00000109952 0.067±0.00 N/A 0.030±0.00 0.023±0.01 N/A N/A N/A N/A N/A N/A N/A 0.136±0.04 N/A 5.082±0.00
ENSMUST00000109954 N/A N/A N/A 0.349±0.34 N/A N/A 0.115±0.00 N/A N/A N/A 0.155±0.02 0.422±0.00 0.164±0.00 35.191±12.79
ENSMUST00000109955 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.113±0.00 N/A N/A N/A 18.772±11.57

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