Transcript ID | Testis |
---|---|
ENST00000399132 | 3.179±0.00 |
Transcript Info |
||||||
Description: | collagen, type XXV, alpha 1 | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000399132 | COL25A1-001 | ENSG00000188517 | 9606 | - | 4:108813699-109302643 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_000872 | CIL_000872_0001 | VISTA | 4:108310752-108912309 |
CIL_0008PU | CIL_0008PU_0001 | VISTA | 4:108672054-109274138 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0001540 | IDA | beta-amyloid binding |
GO:0005576 | IDA | extracellular region |
GO:0005581 | IEA | collagen trimer |
GO:0005615 | IDA | extracellular space |
GO:0005788 | TAS | endoplasmic reticulum lumen |
GO:0005886 | TAS | plasma membrane |
GO:0005887 | IDA | integral component of plasma membrane |
GO:0008201 | IDA | heparin binding |
GO:0016021 | NAS | integral component of membrane |
GO:0022617 | TAS | extracellular matrix disassembly |
GO:0030198 | TAS | extracellular matrix organization |
GO:0030574 | TAS | collagen catabolic process |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000080335 | Col25a1-002 | protein_coding | Mus_musculus | 0 | 2063 |
ENSMUST00000183368 | Col25a1-004 | nonsense_mediated_decay | Mus_musculus | 0 | 1836 |
ENSMUST00000143830 | Col25a1-003 | retained_intron | Mus_musculus | 0 | 1197 |
ENSMUST00000106353 | Col25a1-001 | protein_coding | Mus_musculus | 0 | 852 |