C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TERF1 (TRF1)-interacting nuclear factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399423 TINF2-002 ENSG00000092330 9606 - 14:24239643-24242663 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000399423
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000399423 10.754±0.00 21.084±0.00 5.441±3.06 6.044±4.06 3.603±1.24 3.031±0.94 5.389±0.00 3.501±0.27 6.205±4.56 7.918±0.00 13.689±9.16 19.081±1.99 3.935±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SA CIL_0001SA_0001 CGP 14:24232422-24242674
CIL_0001SE CIL_0001SE_0001 CGP 14:24239643-24264432

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000723 TAS telomere maintenance
GO:0000781 IDA chromosome, telomeric region
GO:0000783 IDA nuclear telomere cap complex
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0010370 IDA perinucleolar chromocenter
GO:0010833 IMP telomere maintenance via telomere lengthening
GO:0010836 IGI negative regulation of protein ADP-ribosylation
GO:0032202 IMP telomere assembly
GO:0032206 IMP positive regulation of telomere maintenance
GO:0032211 IGI negative regulation of telomere maintenance via telomerase
GO:0034502 IMP protein localization to chromosome
GO:0042162 IDA telomeric DNA binding
GO:0050680 IMP negative regulation of epithelial cell proliferation
GO:0070198 IMP protein localization to chromosome, telomeric region

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007733 Tinf2-201 protein_coding Mus_musculus 0 429

Loading