C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001SA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100938-ENSG00000092330 CGP 9606 14:24232422-24242674
GeneTranscriptPositionBiotype
ENSG00000092330 (TINF2)
TERF1 (TRF1)-interacting nuclear factor 2 		ENST00000267415 (TINF2-001) 24239643-24242674 protein_coding
ENST00000399423 (TINF2-002) 24239643-24242663 protein_coding
ENST00000557830 (TINF2-009) 24241391-24242077 retained_intron
ENST00000557915 (TINF2-013) 24239795-24240598 retained_intron
ENST00000557921 (TINF2-010) 24241696-24242558 protein_coding
ENST00000558476 (TINF2-008) 24240603-24242585 protein_coding
ENST00000558510 (TINF2-007) 24241730-24242635 processed_transcript
ENST00000558566 (TINF2-004) 24239682-24242613 protein_coding
ENST00000558703 (TINF2-015) 24239643-24240242 retained_intron
ENST00000559019 (TINF2-006) 24240483-24242632 protein_coding
ENST00000559147 (TINF2-012) 24241114-24242342 retained_intron
ENST00000559549 (TINF2-011) 24240579-24241436 retained_intron
ENST00000559969 (TINF2-005) 24239679-24242288 protein_coding
ENST00000560019 (TINF2-014) 24239643-24240474 protein_coding
ENSG00000129559 (NEDD8)
neural precursor cell expressed, developmentally down-regulated 8 		ENST00000250495 (NEDD8-001) 24216852-24232454 protein_coding
ENST00000396828 (NEDD8-002) 24216857-24232303 nonsense_mediated_decay
ENST00000524927 (NEDD8-004) 24217716-24232354 protein_coding
ENST00000526430 (NEDD8-007) 24217020-24232331 processed_transcript
ENST00000527046 (NEDD8-005) 24216859-24232002 processed_transcript
ENST00000531430 (NEDD8-006) 24216866-24232325 processed_transcript
ENST00000533242 (NEDD8-003) 24226605-24232355 processed_transcript
ENST00000560427 (NEDD8-008) 24216996-24218726 retained_intron
CIL_0001SA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000002326-ENSMUSG00000007589 CGP 10090 14:55672235-55681817
GeneTranscriptPositionBiotype
ENSMUSG00000002326 (Gmpr2)
guanosine monophosphate reductase 2 		ENSMUST00000002397 (Gmpr2-201) 55672235-55678750 protein_coding
ENSMUSG00000007589 (Tinf2)
Terf1 (TRF1)-interacting nuclear factor 2 		ENSMUST00000007733 (Tinf2-201) 55679083-55681817 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001SA_0001ENSG00000092330ENST00000267415ENST00000399423ENST00000557830ENST00000557915ENST00000557921ENST00000558476ENST00000558510ENST00000558566ENST00000558703ENST00000559019ENST00000559147ENST00000559549ENST00000559969ENST00000560019ENSG00000129559ENST00000250495ENST00000396828ENST00000524927ENST00000526430ENST00000527046ENST00000531430ENST00000533242ENST00000560427CIL_0001SA_0002ENSMUSG00000002326ENSMUST00000002397ENSMUSG00000007589ENSMUST00000007733
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001SA_0001ENSG00000092330ENST00000267415ENST00000399423ENST00000557915ENST00000558476ENST00000558566ENST00000559019ENST00000559147ENST00000559549ENST00000559969ENST00000560019ENSG00000129559ENST00000250495ENST00000531430CIL_0001SA_0002ENSMUSG00000002326ENSMUST00000002397ENSMUSG00000007589ENSMUST00000007733
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000092330 ENST00000267415 N/A N/A N/A N/A 3.682±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000399423 10.754±0.00 21.084±0.00 N/A 5.441±3.06 6.044±4.06 3.603±1.24 3.031±0.94 5.389±0.00 3.501±0.27 6.205±4.56 7.918±0.00 13.689±9.16 19.081±1.99 3.935±0.00
ENST00000557830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557915 N/A N/A N/A N/A N/A N/A N/A 2.915±0.00 N/A N/A 10.002±0.00 N/A N/A 7.809±0.00
ENST00000557921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558476 N/A N/A N/A N/A N/A N/A N/A 5.520±3.36 N/A N/A N/A N/A N/A N/A
ENST00000558510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558566 5.295±0.00 N/A 0.994±0.00 N/A N/A N/A 2.737±0.00 N/A N/A 11.891±0.00 N/A 7.703±0.00 7.247±1.25 3.812±0.00
ENST00000558703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559019 N/A N/A 1.663±0.00 3.806±0.00 N/A N/A N/A N/A 4.598±1.28 N/A 10.845±0.00 3.345±0.00 N/A N/A
ENST00000559147 N/A N/A 1.353±0.00 N/A N/A N/A N/A 5.915±0.00 N/A 5.886±0.00 7.295±0.00 N/A N/A N/A
ENST00000559549 N/A N/A N/A N/A 3.333±0.00 2.636±0.00 1.639±0.00 N/A 3.399±0.00 6.183±0.00 N/A N/A N/A N/A
ENST00000559969 5.548±0.00 N/A N/A 5.596±0.00 8.268±0.00 6.327±0.00 N/A 4.234±3.24 2.236±0.00 7.666±0.00 N/A 13.166±0.00 21.674±0.00 9.007±0.53
ENST00000560019 8.143±0.00 24.128±0.00 N/A 7.901±0.00 13.131±0.00 7.023±0.00 N/A 7.643±0.00 3.876±0.00 N/A N/A 14.894±7.02 15.457±0.00 8.517±1.31
ENSG00000129559 ENST00000250495 147.769±0.00 367.500±0.00 21.197±0.00 191.596±132.26 106.746±80.09 138.916±0.00 100.481±83.50 233.636±197.10 70.138±53.53 325.983±0.00 40.754±19.57 188.238±141.05 305.196±102.39 235.553±0.00
ENST00000396828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526430 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531430 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.866±0.00 N/A N/A N/A
ENST00000533242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002326 ENSMUST00000002397 16.704±1.11 13.222±1.60 16.465±0.72 14.842±4.41 12.157±1.43 7.575±2.56 6.362±0.82 13.184±0.50 12.121±5.66 10.423±2.49 1.213±0.28 11.552±3.83 12.458±2.38 12.012±2.07
ENSMUSG00000007589 ENSMUST00000007733 5.710±0.43 5.381±1.41 8.765±0.53 5.812±2.04 5.680±1.07 5.389±1.06 2.783±0.46 4.422±0.51 8.192±5.36 6.443±0.43 6.518±0.81 6.149±2.74 17.270±7.10 14.033±3.03

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