C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 3 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399586 TTC3P1-001 ENSG00000215105 9606 - X:75740831-75746911 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000399586
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000399586 0.702±0.00 0.617±0.00 0.802±0.00 1.118±0.13 0.714±0.14 0.577±0.01 0.423±0.00 0.326±0.23 0.484±0.41 0.555±0.16 0.086±0.03 0.211±0.13 0.125±0.08 0.734±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001Y9 CIL_0001Y9_0001 CGP X:75368427-75785236

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117648 Ttc3-001 protein_coding Mus_musculus 0 3991
ENSMUST00000151770 Ttc3-008 protein_coding Mus_musculus 0 3825
ENSMUST00000155692 Ttc3-003 protein_coding Mus_musculus 0 3825
ENSMUST00000143145 Ttc3-004 nonsense_mediated_decay Mus_musculus 0 3705
ENSMUST00000122895 Ttc3-007 protein_coding Mus_musculus 0 3356
ENSMUST00000147352 Ttc3-002 protein_coding Mus_musculus 0 3068
ENSMUST00000152117 Ttc3-005 protein_coding Mus_musculus 0 2529
ENSMUST00000150346 Ttc3-006 protein_coding Mus_musculus 0 2170
ENSMUST00000147046 Ttc3-009 protein_coding Mus_musculus 0 1487
ENSMUST00000119131 Ttc3-011 protein_coding Mus_musculus 0 889
ENSMUST00000153988 Ttc3-013 protein_coding Mus_musculus 0 806
ENSMUST00000145432 Ttc3-010 nonsense_mediated_decay Mus_musculus 0 756
ENSMUST00000150097 Ttc3-019 protein_coding Mus_musculus 0 579
ENSMUST00000141176 Ttc3-025 protein_coding Mus_musculus 0 470
ENSMUST00000127667 Ttc3-020 protein_coding Mus_musculus 0 276
ENSMUST00000149885 Ttc3-021 protein_coding Mus_musculus 0 248

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