C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145432 Ttc3-010 ENSMUSG00000040785 10090 + 16:94370750-94396382 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001CY CIL_0001CY_0003 CGP 16:94328420-94371015
CIL_0001CX CIL_0001CX_0003 CGP 16:94358763-94469222
CIL_0001D0 CIL_0001D0_0003 CGP 16:94370618-94526830

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005773 IDA vacuole
GO:0010771 IDA negative regulation of cell morphogenesis involved in differentiation
GO:0045665 IDA negative regulation of neuron differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354749 TTC3-001 protein_coding Homo_sapiens 0 745
ENST00000355666 TTC3-201 protein_coding Homo_sapiens 0 745
ENST00000399010 TTC3-015 protein_coding Homo_sapiens 0 1254
ENST00000399017 TTC3-003 protein_coding Homo_sapiens 0 745
ENST00000399586 TTC3P1-001 processed_pseudogene Homo_sapiens 0 756
ENST00000418766 TTC3-008 protein_coding Homo_sapiens 0 745
ENST00000438055 TTC3-023 protein_coding Homo_sapiens 0 398
ENST00000450533 TTC3-005 protein_coding Homo_sapiens 0 745
ENST00000460328 TTC3-013 retained_intron Homo_sapiens 0 346
ENST00000479930 TTC3-002 processed_transcript Homo_sapiens 0 507
ENST00000484047 TTC3-004 processed_transcript Homo_sapiens 0 514
ENST00000485402 TTC3-022 processed_transcript Homo_sapiens 0 865
ENST00000621658 RP11-157K17.5-001 transcribed_processed_pseudogene Homo_sapiens 0 303

Loading