C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | tetratricopeptide repeat domain 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000152117  |
Ttc3-005 |
ENSMUSG00000040785 |
10090 | + |
16:94370767-94442669  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001CY | CIL_0001CY_0003 | CGP | 16:94328420-94371015 |
| CIL_0001CX | CIL_0001CX_0003 | CGP | 16:94358763-94469222 |
| CIL_0001D0 | CIL_0001D0_0003 | CGP | 16:94370618-94526830 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004842 | ISS | ubiquitin-protein transferase activity |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | ISS | nucleus |
| GO:0005773 | IDA | vacuole |
| GO:0006511 | ISS | ubiquitin-dependent protein catabolic process |
| GO:0008270 | IEA | zinc ion binding |
| GO:0010771 | IDA | negative regulation of cell morphogenesis involved in differentiation |
| GO:0016874 | IEA | ligase activity |
| GO:0045665 | IDA | negative regulation of neuron differentiation |
| GO:0070936 | ISS | protein K48-linked ubiquitination |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000354749
|
TTC3-001 | protein_coding | Homo_sapiens | 0 | 2540 |
|
ENST00000355666
|
TTC3-201 | protein_coding | Homo_sapiens | 0 | 2540 |
|
ENST00000399017
|
TTC3-003 | protein_coding | Homo_sapiens | 0 | 2540 |
|
ENST00000399586
|
TTC3P1-001 | processed_pseudogene | Homo_sapiens | 0 | 2529 |
|
ENST00000411496
|
TTC3-017 | protein_coding | Homo_sapiens | 0 | 355 |
|
ENST00000414818
|
TTC3-016 | protein_coding | Homo_sapiens | 0 | 745 |
|
ENST00000418766
|
TTC3-008 | protein_coding | Homo_sapiens | 0 | 2540 |
|
ENST00000438055
|
TTC3-023 | protein_coding | Homo_sapiens | 0 | 2540 |
|
ENST00000450533
|
TTC3-005 | protein_coding | Homo_sapiens | 0 | 1439 |
|
ENST00000463216
|
TTC3-010 | processed_transcript | Homo_sapiens | 0 | 392 |
|
ENST00000476784
|
TTC3-007 | retained_intron | Homo_sapiens | 0 | 2540 |
|
ENST00000479930
|
TTC3-002 | processed_transcript | Homo_sapiens | 0 | 2540 |
|
ENST00000481605
|
TTC3-009 | processed_transcript | Homo_sapiens | 0 | 1456 |
|
ENST00000485402
|
TTC3-022 | processed_transcript | Homo_sapiens | 0 | 2540 |
|
ENST00000492275
|
TTC3-011 | processed_transcript | Homo_sapiens | 0 | 375 |
|
ENST00000494243
|
TTC3-012 | processed_transcript | Homo_sapiens | 0 | 403 |
|
ENST00000540756
|
TTC3-024 | protein_coding | Homo_sapiens | 0 | 1871 |
