C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147352 Ttc3-002 ENSMUSG00000040785 10090 + 16:94370739-94442667 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001CY CIL_0001CY_0003 CGP 16:94328420-94371015
CIL_0001CX CIL_0001CX_0003 CGP 16:94358763-94469222
CIL_0001D0 CIL_0001D0_0003 CGP 16:94370618-94526830

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005773 IDA vacuole
GO:0010771 IDA negative regulation of cell morphogenesis involved in differentiation
GO:0045665 IDA negative regulation of neuron differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354749 TTC3-001 protein_coding Homo_sapiens 0 3081
ENST00000355666 TTC3-201 protein_coding Homo_sapiens 0 3081
ENST00000399010 TTC3-015 protein_coding Homo_sapiens 0 396
ENST00000399017 TTC3-003 protein_coding Homo_sapiens 0 3081
ENST00000399586 TTC3P1-001 processed_pseudogene Homo_sapiens 0 3068
ENST00000411496 TTC3-017 protein_coding Homo_sapiens 0 355
ENST00000414818 TTC3-016 protein_coding Homo_sapiens 0 745
ENST00000418766 TTC3-008 protein_coding Homo_sapiens 0 3081
ENST00000438055 TTC3-023 protein_coding Homo_sapiens 0 3513
ENST00000450533 TTC3-005 protein_coding Homo_sapiens 0 2237
ENST00000460328 TTC3-013 retained_intron Homo_sapiens 0 346
ENST00000463216 TTC3-010 processed_transcript Homo_sapiens 0 800
ENST00000476784 TTC3-007 retained_intron Homo_sapiens 0 2699
ENST00000479930 TTC3-002 processed_transcript Homo_sapiens 0 2891
ENST00000481605 TTC3-009 processed_transcript Homo_sapiens 0 1515
ENST00000485402 TTC3-022 processed_transcript Homo_sapiens 0 3081
ENST00000492275 TTC3-011 processed_transcript Homo_sapiens 0 784
ENST00000494243 TTC3-012 processed_transcript Homo_sapiens 0 756
ENST00000540756 TTC3-024 protein_coding Homo_sapiens 0 2279
ENST00000621658 RP11-157K17.5-001 transcribed_processed_pseudogene Homo_sapiens 8.99998e-41 171

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