C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transport and golgi organization 2 homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399807 TANGO2-004 ENSG00000183597 9606 + 22:20021089-20065862 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000399807
Transcript ID Ovary Testis
ENST00000399807 1.880±0.00 2.585±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BW CIL_0008BW_0001 VISTA 22:19453681-20054184
CIL_00099J CIL_00099J_0001 VISTA 22:19461833-20062532
CIL_00095F CIL_00095F_0001 VISTA 22:19497462-20100487
CIL_0006HK CIL_0006HK_0002 CGP 22:19969896-20065926

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183630 TANGO2-001 protein_coding Mus_musculus 1e-35 156
ENSMUST00000115628 Tango2-001 protein_coding Mus_musculus 1e-35 156
ENSMUST00000183496 TANGO2-003 retained_intron Mus_musculus 5e-24 117
ENSMUST00000134385 Tango2-003 retained_intron Mus_musculus 5e-24 117
ENSMUST00000185024 TANGO2-005 retained_intron Mus_musculus 2e-22 111
ENSMUST00000184698 TANGO2-006 retained_intron Mus_musculus 2e-22 111
ENSMUST00000184631 TANGO2-010 protein_coding Mus_musculus 2e-22 111
ENSMUST00000184324 TANGO2-004 nonsense_mediated_decay Mus_musculus 2e-22 111
ENSMUST00000150152 Tango2-005 retained_intron Mus_musculus 2e-22 111
ENSMUST00000145203 Tango2-006 retained_intron Mus_musculus 2e-22 111
ENSMUST00000130752 Tango2-010 protein_coding Mus_musculus 2e-22 111
ENSMUST00000125287 Tango2-004 nonsense_mediated_decay Mus_musculus 2e-22 111
ENSMUST00000184457 TANGO2-002 nonsense_mediated_decay Mus_musculus 9e-22 110
ENSMUST00000128580 Tango2-002 nonsense_mediated_decay Mus_musculus 9e-22 110

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