C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin alpha FG-GAP repeat containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399932 ITFG3-001 ENSG00000167930 9606 + 16:234546-266125 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartLiverLungMuscleOvaryPlacentaENST00000399932
Transcript ID Adrenal Colon Heart Liver Lung Muscle Ovary Placenta
ENST00000399932 3.630±0.00 4.901±0.00 6.627±0.00 1.195±0.68 5.237±0.00 6.569±0.00 9.779±9.47 22.156±1.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094P CIL_00094P_0001 VISTA 16:-195470-405616
CIL_0008HK CIL_0008HK_0001 VISTA 16:-187027-414801

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0009986 IDA cell surface
GO:0016021 IEA integral component of membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114988 Itfg3-001 protein_coding Mus_musculus 0 1026
ENSMUST00000118487 Itfg3-002 protein_coding Mus_musculus 0 1016

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