C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) subunit, alpha type, 6 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400275 PSMA6P1-001 ENSG00000215414 9606 + Y:13286638-13287378 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainKidneyMusclePlacentaTestisENST00000400275
Transcript ID Adipose Adrenal Bladder Brain Kidney Muscle Placenta Testis
ENST00000400275 0.015±0.00 0.047±0.00 0.079±0.00 0.035±0.02 0.071±0.00 0.028±0.00 0.535±0.00 0.154±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021T CIL_00021T_0002 CGP Y:12904937-13480673

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021412 Psma6-001 protein_coding Mus_musculus 0 1016
ENSMUST00000163070 Psma6-002 protein_coding Mus_musculus 0 931
ENSMUST00000162711 Psma6-003 nonsense_mediated_decay Mus_musculus 0 811
ENSMUST00000162972 Psma6-004 processed_transcript Mus_musculus 0 584

Loading