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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | proteasome (prosome, macropain) subunit, alpha type 6 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000162711  |
Psma6-003 |
ENSMUSG00000021024 |
10090 | + |
12:55398795-55418441  |
nonsense_mediated_decay |
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00045I | CIL_00045I_0002 | CGP | 12:55299577-55418454 |
| CIL_0008MF | CIL_0008MF_0002 | VISTA | 12:55314270-55915258 |
| CIL_0008ME | CIL_0008ME_0002 | VISTA | 12:55343542-55944223 |
| CIL_0001RJ | CIL_0001RJ_0002 | CGP | 12:55384222-55492647 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004175 | IEA | endopeptidase activity |
| GO:0005839 | IDA | proteasome core complex |
| GO:0006511 | IEA | ubiquitin-dependent protein catabolic process |
| GO:0019773 | IEA | proteasome core complex, alpha-subunit complex |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000261479
|
PSMA6-001 | protein_coding | Homo_sapiens | 0 | 1007 |
|
ENST00000400275
|
PSMA6P1-001 | processed_pseudogene | Homo_sapiens | 0 | 811 |
|
ENST00000457574
|
PSMA6P2-001 | processed_pseudogene | Homo_sapiens | 0 | 503 |
|
ENST00000540871
|
PSMA6-002 | protein_coding | Homo_sapiens | 0 | 1007 |
|
ENST00000553688
|
PSMA6-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 387 |
|
ENST00000553809
|
PSMA6-010 | protein_coding | Homo_sapiens | 0 | 809 |
|
ENST00000554457
|
PSMA6-005 | retained_intron | Homo_sapiens | 0 | 270 |
|
ENST00000554541
|
PSMA6-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 1144 |
|
ENST00000554620
|
PSMA6-014 | nonsense_mediated_decay | Homo_sapiens | 0 | 575 |
|
ENST00000554843
|
PSMA6-008 | retained_intron | Homo_sapiens | 0 | 363 |
|
ENST00000554961
|
PSMA6-009 | nonsense_mediated_decay | Homo_sapiens | 0 | 381 |
|
ENST00000555050
|
PSMA6-011 | retained_intron | Homo_sapiens | 0 | 270 |
|
ENST00000555764
|
PSMA6-004 | protein_coding | Homo_sapiens | 0 | 1007 |
|
ENST00000556221
|
PSMA6-012 | protein_coding | Homo_sapiens | 0 | 381 |
|
ENST00000556506
|
PSMA6-013 | protein_coding | Homo_sapiens | 0 | 627 |
|
ENST00000557565
|
KIAA0391-001 | nonsense_mediated_decay | Homo_sapiens | 0 | 1007 |
|
ENST00000622405
|
PSMA6-201 | protein_coding | Homo_sapiens | 0 | 1144 |
