C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CTAGE family, member 12, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400348 CTAGE12P-001 ENSG00000215441 9606 - 9:27608382-27610745 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartLiverOvaryTestisENST00000400348
Transcript ID Adrenal Brain Breast Heart Liver Ovary Testis
ENST00000400348 0.018±0.00 0.004±0.00 0.038±0.00 0.013±0.01 0.008±0.00 0.056±0.05 0.012±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00061K CIL_00061K_0001 CGP 9:27546545-28670286

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000176464 Ctage5-011 protein_coding Mus_musculus 0 1574
ENSMUST00000175912 Ctage5-003 protein_coding Mus_musculus 0 1567
ENSMUST00000170992 Ctage5-007 protein_coding Mus_musculus 0 1526
ENSMUST00000176892 Ctage5-002 protein_coding Mus_musculus 0 1526
ENSMUST00000176752 Ctage5-004 nonsense_mediated_decay Mus_musculus 0 1522
ENSMUST00000176322 Ctage5-008 protein_coding Mus_musculus 0 1520
ENSMUST00000069430 Ctage5-001 protein_coding Mus_musculus 0 1520
ENSMUST00000176617 Ctage5-014 nonsense_mediated_decay Mus_musculus 0 1341
ENSMUST00000176336 Ctage5-013 nonsense_mediated_decay Mus_musculus 0 1038
ENSMUST00000177162 Ctage5-012 protein_coding Mus_musculus 0 1005
ENSMUST00000177225 Ctage5-006 protein_coding Mus_musculus 0 998
ENSMUST00000175877 Ctage5-010 protein_coding Mus_musculus 0 957
ENSMUST00000175659 Ctage5-015 retained_intron Mus_musculus 0 388

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