C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400354 RP5-827A12.2-001 ENSG00000215444 9606 + 20:51734533-51735067 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartENST00000400354
Transcript ID Adrenal Brain Colon Heart
ENST00000400354 0.040±0.00 0.834±0.00 0.101±0.00 0.070±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007HZ CIL_0007HZ_0001 CGP 20:51386957-51768634
CIL_0007I5 CIL_0007I5_0001 CGP 20:51596514-51802520

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119801 Gm11955-001 processed_pseudogene Mus_musculus 0 204
ENSMUST00000186887 RP23-186M2.2-001 processed_pseudogene Mus_musculus 8e-36 154
ENSMUST00000150617 Gm4487-001 processed_pseudogene Mus_musculus 3e-25 119
ENSMUST00000121550 Gm11933-001 processed_pseudogene Mus_musculus 0.000000000002 77

Loading