C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11955
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119801 Gm11955-001 ENSMUSG00000082364 10090 + 11:4107755-4108224 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungPlacentaTestisENSMUST00000119801
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Placenta Testis
ENSMUST00000119801 0.264±0.00 1.129±0.00 0.461±0.05 0.254±0.00 0.152±0.04 0.118±0.00 1.944±1.79 0.324±0.19 0.095±0.02 0.101±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294189 RPL29-001 protein_coding Homo_sapiens 0 340
ENST00000400354 RP5-827A12.2-001 processed_pseudogene Homo_sapiens 0 204
ENST00000413677 RP4-595K12.1-001 processed_pseudogene Homo_sapiens 0 307
ENST00000432828 AC092162.2-001 processed_pseudogene Homo_sapiens 2e-22 110
ENST00000440227 RPL29P7-001 processed_pseudogene Homo_sapiens 0 283
ENST00000442089 RP5-1057J7.1-001 processed_pseudogene Homo_sapiens 0 283
ENST00000443998 RP11-632C17__A.1-001 processed_pseudogene Homo_sapiens 0 329
ENST00000446953 RP1-130G2.1-001 processed_pseudogene Homo_sapiens 0 239
ENST00000451924 RP11-42D20.1-001 processed_pseudogene Homo_sapiens 0 296
ENST00000463466 RP11-874G11.1-001 processed_pseudogene Homo_sapiens 0 250
ENST00000465069 RPL29P25-001 processed_pseudogene Homo_sapiens 0 202
ENST00000466397 RPL29-005 protein_coding Homo_sapiens 0 340
ENST00000475248 RPL29-008 protein_coding Homo_sapiens 0 340
ENST00000478358 RP11-490G8.1-001 processed_pseudogene Homo_sapiens 0 340
ENST00000479017 RPL29-009 protein_coding Homo_sapiens 0 340
ENST00000480306 RPL29-004 nonsense_mediated_decay Homo_sapiens 1e-26 124
ENST00000481629 RPL29-003 protein_coding Homo_sapiens 9e-28 128
ENST00000481681 RPL29P12-001 processed_pseudogene Homo_sapiens 0 346
ENST00000482584 RP11-342F17.1-001 processed_pseudogene Homo_sapiens 0 303
ENST00000486188 RPL29P23-001 processed_pseudogene Homo_sapiens 1.99965e-42 176
ENST00000486565 RPL29-002 retained_intron Homo_sapiens 0.00000002 64
ENST00000486611 RPL29P3-001 processed_pseudogene Homo_sapiens 0 252
ENST00000492277 RPL29-007 protein_coding Homo_sapiens 0 340
ENST00000494408 RPL29P11-001 processed_pseudogene Homo_sapiens 0 346
ENST00000495383 RPL29-006 protein_coding Homo_sapiens 0 340
ENST00000496042 RP11-452G18.1-001 processed_pseudogene Homo_sapiens 6.00036e-42 174

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