C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400363 RP5-890O15.3-001 ENSG00000215450 9606 - 20:47160838-47161700 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000400363
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000400363 0.070±0.00 0.075±0.00 0.066±0.04 0.160±0.03 0.169±0.00 0.046±0.00 0.068±0.00 0.073±0.00 0.152±0.00 0.095±0.00 0.058±0.00 0.073±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001XY CIL_0001XY_0001 CGP 20:46709487-47188844
CIL_0004DE CIL_0004DE_0001 CGP 20:46894624-47356889
CIL_0008NW CIL_0008NW_0001 VISTA 20:47083832-47684912

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000184266 Rps2-ps5-001 processed_pseudogene Mus_musculus 0 564
ENSMUST00000121414 Rps2-ps9-001 processed_pseudogene Mus_musculus 0 510
ENSMUST00000117955 Gm14263-001 processed_pseudogene Mus_musculus 0 501

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