C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S2, pseudogene 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184266 Rps2-ps5-001 ENSMUSG00000098713 10090 + 14:69158671-69159519 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000184266
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000184266 0.621±0.27 0.520±0.43 1.499±1.24 0.387±0.31 0.358±0.18 0.428±0.18 0.155±0.10 0.207±0.08 0.684±1.17 0.315±0.14 0.111±0.02 0.444±0.23 0.201±0.11 0.392±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006NB CIL_0006NB_0002 CGP 14:69029289-69175518

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314255 RPS2P28-001 processed_pseudogene Homo_sapiens 0 680
ENST00000343262 RPS2-001 protein_coding Homo_sapiens 0 837
ENST00000393351 RP5-1106E3.1-001 processed_pseudogene Homo_sapiens 0 701
ENST00000397318 RPS2P55-001 processed_pseudogene Homo_sapiens 0 817
ENST00000400363 RP5-890O15.3-001 processed_pseudogene Homo_sapiens 0 564
ENST00000402069 RP3-337H4.6-001 processed_pseudogene Homo_sapiens 0 848
ENST00000423464 RP11-183G22.1-001 processed_pseudogene Homo_sapiens 0 747
ENST00000428058 CTD-2666L21.2-001 processed_pseudogene Homo_sapiens 0 760
ENST00000434010 RPS2P1-001 processed_pseudogene Homo_sapiens 0 684
ENST00000436136 RP11-16L9.1-001 processed_pseudogene Homo_sapiens 0 641
ENST00000438210 RP3-342P20.2-001 processed_pseudogene Homo_sapiens 0 728
ENST00000441047 RPS2P48-001 processed_pseudogene Homo_sapiens 0 785
ENST00000442812 RP11-377K22.2-001 processed_pseudogene Homo_sapiens 8.99999e-40 165
ENST00000443417 RPS2P35-001 processed_pseudogene Homo_sapiens 0 728
ENST00000449856 AC022210.2-001 processed_pseudogene Homo_sapiens 0 817
ENST00000457299 AC087163.2-001 processed_pseudogene Homo_sapiens 0 604
ENST00000459634 RP11-192C21.1-001 processed_pseudogene Homo_sapiens 0 669
ENST00000474589 RP11-713P14.1-001 processed_pseudogene Homo_sapiens 0 569
ENST00000479476 RPS2P6-001 processed_pseudogene Homo_sapiens 0 695
ENST00000480705 RP11-296A18.5-001 processed_pseudogene Homo_sapiens 0 806
ENST00000488803 RPS2P5-001 processed_pseudogene Homo_sapiens 0 845
ENST00000488906 RP5-867C24.1-001 processed_pseudogene Homo_sapiens 0 708
ENST00000491725 RP11-810P12.1-001 processed_pseudogene Homo_sapiens 0 573
ENST00000492365 KB-1683C8.1-001 processed_pseudogene Homo_sapiens 0 723
ENST00000526522 RPS2-006 protein_coding Homo_sapiens 0 411
ENST00000526586 RPS2-015 protein_coding Homo_sapiens 0 215
ENST00000527109 RPS2-005 retained_intron Homo_sapiens 0 407
ENST00000527871 RPS2-004 retained_intron Homo_sapiens 0 407
ENST00000529806 RPS2-008 protein_coding Homo_sapiens 0 717
ENST00000530225 RPS2-017 protein_coding Homo_sapiens 0 215
ENST00000531065 RPS2-003 retained_intron Homo_sapiens 0 739
ENST00000532746 RPS2-012 nonsense_mediated_decay Homo_sapiens 0 739
ENST00000533161 RPS2-002 retained_intron Homo_sapiens 0 407
ENST00000533186 RPS2-013 protein_coding Homo_sapiens 0 627
ENST00000533872 RPS2-011 retained_intron Homo_sapiens 0 627
ENST00000554490 RPS2P2-001 processed_pseudogene Homo_sapiens 0 621
ENST00000604358 CTC-661I16.2-001 processed_pseudogene Homo_sapiens 0 187
ENST00000610837 RP11-19G24.1-001 processed_pseudogene Homo_sapiens 0 614
ENST00000612648 CTB-75G16.1-001 processed_pseudogene Homo_sapiens 0 717

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