C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neurobeachin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400445 NBEA-202 ENSG00000172915 9606 + 13:34942287-35672735 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryTestisENST00000400445
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Testis
ENST00000400445 0.166±0.00 0.404±0.00 5.362±0.34 0.191±0.00 0.987±0.00 0.687±0.07 0.246±0.00 1.142±0.00 0.314±0.00 0.419±0.26 0.500±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UG CIL_0008UG_0001 VISTA 13:34898135-35500283
CIL_0004C5 CIL_0004C5_0002 CGP 13:34942287-35673022

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005802 ISS trans-Golgi network
GO:0005829 ISS cytosol
GO:0005886 ISS plasma membrane
GO:0008104 IEA protein localization
GO:0012505 ISS endomembrane system
GO:0019901 IEA protein kinase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029374 Nbea-201 protein_coding Mus_musculus 0 13180
ENSDART00000102566 nbeaa-201 protein_coding Danio_rerio 0 1914
ENSDART00000114630 nbeaa-001 protein_coding Danio_rerio 0 1897

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