C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SAM domain, SH3 domain and nuclear localization signals 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400564 SAMSN1-003 ENSG00000155307 9606 - 21:14485228-14546341 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartMuscleTestisENST00000400564
Transcript ID Brain Colon Heart Muscle Testis
ENST00000400564 0.415±0.00 1.292±0.00 0.064±0.00 0.216±0.00 0.200±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000MS CIL_0000MS_0002 CGP 21:14371115-14583402

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001784 IDA phosphotyrosine binding
GO:0002820 ISS negative regulation of adaptive immune response
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0042995 IEA cell projection
GO:0044822 IDA poly(A) RNA binding
GO:0050732 ISS negative regulation of peptidyl-tyrosine phosphorylation
GO:0050869 ISS negative regulation of B cell activation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114239 Samsn1-003 protein_coding Mus_musculus 0 460
ENSMUST00000114240 Samsn1-001 protein_coding Mus_musculus 0 460

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