C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: BARX homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000401724 BARX1-002 ENSG00000131668 9606 - 9:93951627-93953431 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000401724
Transcript ID Ovary Placenta Testis
ENST00000401724 0.191±0.00 0.081±0.00 1.072±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QG CIL_0008QG_0001 VISTA 9:93400439-94002641
CIL_0008WO CIL_0008WO_0001 VISTA 9:93563376-94165036
CIL_0008XX CIL_0008XX_0001 VISTA 9:93838844-94440653

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 NAS sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021813 Barx1-001 protein_coding Mus_musculus 0 612

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