C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S4X pseudogene 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000402039 RPS4XP8-001 ENSG00000219146 9606 + 6:154576309-154577079 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLungMuscleOvaryENST00000402039
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Lung Muscle Ovary
ENST00000402039 0.114±0.00 0.205±0.00 0.017±0.00 0.085±0.00 0.120±0.01 0.085±0.00 0.123±0.00 0.244±0.00 0.021±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033683 Rps4x-001 protein_coding Mus_musculus 0 800
ENSMUST00000165198 Gm9294-001 processed_pseudogene Mus_musculus 0 734
ENSDART00000128917 rps4x-001 protein_coding Danio_rerio 0 477
ENSMUST00000121609 Gm12267-001 processed_pseudogene Mus_musculus 0 379
ENSMUST00000155028 Rps4x-003 retained_intron Mus_musculus 0 346
ENSDART00000007957 rps4x-003 retained_intron Danio_rerio 0 339
ENSMUST00000118165 Gm14020-001 processed_pseudogene Mus_musculus 5e-30 135

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